Gene omics information

Query gene ID PtpAffx.112555.2.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7393.6PtpAffx.112555.2.S1_s_atCV242108hypothetical protein-2e-96At1g15110phosphatidyl serine synthase family proteinS.X.H.G.
0.6791.1PtpAffx.135514.1.S1_atDN498152hypothetical protein-1e-7At5g07910leucine-rich repeat family proteinS.X.H.G.
0.4369.7Ptp.5383.1.S1_atAJ768686hypothetical protein-1e-32At5g22000RHF2A (RING-H2 GROUP F2A)S.X.H.G.
0.4067.0PtpAffx.93050.1.S1_atDN500932hypothetical protein-1e-7At3g48070protein binding / zinc ion bindingS.X.H.G.
0.4067.0PtpAffx.217198.1.S1_atpmrna32362--1e-99At5g22950VPS24.1S.X.H.G.
0.3559.7PtpAffx.99107.3.A1_s_atCV240653hypothetical protein-6e-64At4g19640ARA7S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.696.2GSM244430non infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.395.8GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
4.395.8GSM244432non infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.092.9GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.992.5GSM372097Clone3200_LPI5_N-_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.892.1GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.791.8GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.389.8GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
2.389.8GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.289.3GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.7701655PtpAffx.208907.1.S1_atpmrna17669hypothetical protein-5e-122At1g15110phosphatidyl serine synthase family proteinC.G.S.X.
0.337e-118424PtpAffx.112555.1.S1_atDN493776hypothetical protein-2e-24At1g15110phosphatidyl serine synthase family proteinC.G.S.X.
0.123e-58226PtpAffx.208365.1.S1_atpmrna16636hypothetical protein-8e-12At3g06140zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.106e-32139PtpAffx.208511.1.S1_atpmrna16891hypothetical protein-2e-13At3g06140zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.017e-136PtpAffx.28951.1.S1_atCV276615hypothetical protein-4e+0At5g50910unknown proteinC.G.S.X.
0.027e-136PtpAffx.209472.1.S1_atpmrna18782hypothetical protein-5e-1At1g72030GCN5-related N-acetyltransferase (GNAT) family proteinC.G.S.X.
0.017e-136PtpAffx.160252.1.S1_atCV262277hypothetical protein-1e-11At4g26640WRKY20C.G.S.X.
0.023e+034PtpAffx.9539.1.A1_atBI125176hypothetical protein-6e-62At5g20930TSL (TOUSLED)C.G.S.X.
0.023e+034PtpAffx.82864.1.A1_s_atCV228509hypothetical protein-2e-6At1g49580calcium-dependent protein kinase, putative / CDPK, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.512e-96353Arabidopsis thalianaAt1g15110838074phosphatidyl serine synthase family proteinF:CDP-diacylglycerol-serine O-phosphatidyltransferase activity;P:phosphatidylserine biosynthetic process;C:cellular_component unknown;MOPF---C.G.S.X.
0.195e-2099Glycine maxGmaAffx.45592.2.S1_atBI702307--2e-43At1g15110phosphatidyl serine synthase family proteinC.G.S.X.
0.235e-30131Hordeum vulgareContig16873_atContig16873--5e-35At1g15110phosphatidyl serine synthase family proteinC.G.S.X.
0.274e-1273Oryza sativaOsAffx.21499.1.S1_at---0C.G.S.X.
0.122e-1273Triticum aestivumTa.3174.1.S1_atBJ275078--2e-6At1g15110phosphatidyl serine synthase family proteinC.G.S.X.
0.022e+032Vitis vinifera1612932_atCD717773--1e+0At2g11522unknown proteinC.G.S.X.
0.021e+130Zea maysZmAffx.163.1.A1_atAI668189pyrimidine-specific ribonucleoside hydrolase rihB-8e-1At5g55240caleosin-related family protein / embryo-specific protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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