Gene omics information

Query gene ID PtpAffx.108986.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.108986.1.S1_atAJ777271hypothetical protein-3e-38At5g54800GPT1S.X.H.G.
0.6791.1PtpAffx.12443.4.A1_s_atCV240107cytochrome P450 cinnamate 4-hydroxylase-7e-24At2g30490C4H (CINNAMATE-4-HYDROXYLASE)S.X.H.G.
0.6791.1Ptp.2573.1.S1_atCV237401hypothetical protein-1e-95At5g37600ATGSR1S.X.H.G.
0.6086.0Ptp.3608.1.S1_s_atAJ224895.1trans-caffeoyl-coa 3-o-methyltransferase-6e-78At4g34050caffeoyl-CoA 3-O-methyltransferase, putativeS.X.H.G.
0.5078.6Ptp.3043.1.S1_s_atAF041049.14-Coumarate:CoA ligase-3e-13At1g516804CL1 (4-COUMARATE:COA LIGASE 1)S.X.H.G.
0.4067.0PtpAffx.211196.1.S1_x_atpmrna22005hypothetical protein-1e-116At5g54800GPT1S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.998.9GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
6.898.0GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
6.898.0GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
5.296.8GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
5.096.6GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
4.495.9GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
3.894.9GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
3.794.7GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
3.594.3GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
3.393.7GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.330682PtpAffx.211196.1.S1_x_atpmrna22005hypothetical protein-1e-116At5g54800GPT1C.G.S.X.
0.330682PtpAffx.211196.1.S1_atpmrna22005hypothetical protein-1e-116At5g54800GPT1C.G.S.X.
0.532e-89329Ptp.1825.1.A1_s_atCK093131hypothetical protein-5e-28At5g54800GPT1C.G.S.X.
0.305e-38159PtpAffx.203697.1.S1_atpmrna7322hypothetical protein-3e-80At1g61800GPT2C.G.S.X.
0.162e-1273PtpAffx.8886.1.S1_s_atBU817264hypothetical protein-6e-10At5g54800GPT1C.G.S.X.
0.015e-136PtpAffx.219332.1.S1_x_atpmrna35221hypothetical protein-2e-14At1g29720protein kinase family proteinC.G.S.X.
0.015e-136PtpAffx.204443.1.S1_s_atpmrna8720aldehyde oxidase 1 /// aldehyde oxidase 3-1e-17At1g04580AAO4 (ARABIDOPSIS ALDEHYDE OXIDASE 4)C.G.S.X.
0.022e+034PtpAffx.216908.1.S1_atpmrna31972hypothetical protein-4e-2At1g47710serpin, putative / serine protease inhibitor, putativeC.G.S.X.
0.022e+034PtpAffx.203144.1.S1_atpmrna6229hypothetical protein-6e-13At1g31600oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.293e-38159Arabidopsis thalianaAt5g54800835570GPT1glucose6-Phosphate/phosphate transporter 1---C.G.S.X.
0.252e-25117Glycine maxGma.1386.1.S1_atCD415169--4e-21At5g54800GPT1C.G.S.X.
0.242e-1065Hordeum vulgareContig4880_atContig4880--2e-20At1g61800GPT2C.G.S.X.
0.251e-39165Oryza sativaOs08g0187800AF375053.1-Glucose-6-phosphate/phosphate-translocatorprecursor1e-39At1g61800GPT2C.G.S.X.
0.182e-1273Triticum aestivumTa.9530.1.S1_atCD894205--1e-30At5g54800GPT1C.G.S.X.
0.332e-95347Vitis vinifera1620209_atCF404507hypothetical protein LOC100258996-8e-87At5g54800GPT1C.G.S.X.
0.221e-1789Zea maysZm.368.1.A1_a_atAF020813.1glucose-6-phosphate/phosphate-translocator precursor /// hypothetical protein LOC100193334-4e-37At1g61800GPT2C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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