Gene omics information

Query gene ID PtpAffx.107925.1.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7393.6PtpAffx.107925.1.A1_atDN485210hypothetical protein-8e-1At5g22380anac090 (Arabidopsis NAC domain containing protein 90)S.X.H.G.
0.6388.1PtpAffx.5890.1.S1_atCV230515hypothetical protein-4e-15At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)S.X.H.G.
0.6187.0PtpAffx.2333.1.S1_atCK091733hypothetical protein-2e+0At1g47720OSB1 (Organellar Single-stranded)S.X.H.G.
0.6187.0Ptp.1275.2.S1_s_atCV247404type II peroxiredoxin-1e-22At1g65980TPX1 (thioredoxin-dependent peroxidase 1)S.X.H.G.
0.5582.2Ptp.2313.1.A1_atCV257881hypothetical protein-1e-1At4g17650aromatic-rich family proteinS.X.H.G.
0.5582.2PtpAffx.5384.1.S1_atCV247252--5e-16At5g25450ubiquinol-cytochrome C reductase complex 14 kDa protein, putativeS.X.H.G.
0.4369.7PtpAffx.25383.2.A1_atCA823290hypothetical protein-2e-15At3g58040SINAT2 (SEVEN IN ABSENTIA OF ARABIDOPSIS 2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
15.099.5GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
10.599.0GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
9.498.8GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
8.298.5GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
6.297.6GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.992.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.791.8GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
2.490.4GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
2.389.8GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
2.289.3GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-240PtpAffx.68890.1.A1_atCV280484hypothetical protein-1e-50At5g52970thylakoid lumen 15.0 kDa proteinC.G.S.X.
0.057e-238PtpAffx.75787.2.A1_s_atCV256635AP2/ERF domain-containing transcription factor-1e+0At2g19720rps15ab (ribosomal protein S15A B)C.G.S.X.
0.057e-238PtpAffx.75787.2.A1_atCV256635AP2/ERF domain-containing transcription factor-1e+0At2g19720rps15ab (ribosomal protein S15A B)C.G.S.X.
0.013e-136PtpAffx.225194.1.S1_x_atpmrna44349hypothetical protein-3e-8At4g08850kinaseC.G.S.X.
0.023e-136PtpAffx.224970.1.S1_s_atpmrna43927hypothetical protein-1e-1At2g01818zinc ion bindingC.G.S.X.
0.031e+034PtpAffx.224226.1.S1_atpmrna42588hypothetical protein-2e-19At1g06180ATMYB13 (MYB DOMAIN PROTEIN 13)C.G.S.X.
0.021e+034PtpAffx.213489.1.S1_s_atpmrna26366hypothetical protein-6e-17At3g09690hydrolase, alpha/beta fold family proteinC.G.S.X.
0.031e+034PtpAffx.208428.1.S1_s_atpmrna16744hypothetical protein-2e-86At3g17440NPSN13 (NOVEL PLANT SNARE 13)C.G.S.X.
0.031e+034PtpAffx.208428.1.S1_atpmrna16744hypothetical protein-2e-86At3g17440NPSN13 (NOVEL PLANT SNARE 13)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.048e-134Arabidopsis thalianaAt5g22380832299anac090 (Arabidopsis NAC domain containing protein 90)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P---C.G.S.X.
0.051e+034Glycine maxGma.17155.1.S1_atBE023165--1e-2At2g06166-C.G.S.X.
0.041e-136Hordeum vulgareContig24940_atContig24940--1e+0At4g12000-C.G.S.X.
0.032e+034Oryza sativaOs10g0463300AK109194.1-UspA domain containing protein1e-1At3g03290universal stress protein (USP) family proteinC.G.S.X.
0.055e-238Triticum aestivumTaAffx.84254.1.S1_atCA641434--1e+1At3g10195-C.G.S.X.
0.042e-134Vitis vinifera1621160_atCF208890--2e-1At5g24250unknown proteinC.G.S.X.
0.046e+030Zea maysZmAffx.745.1.A1_atAI745776--3e+0At5g17650glycine/proline-rich proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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