Gene omics information

Query gene ID PtpAffx.10771.5.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9799.9PtpAffx.10771.5.S1_atCV236361hypothetical protein-3e-51At1g75380wound-responsive protein-relatedS.X.H.G.
0.2543.6PtpAffx.207232.1.S1_atpmrna14340hypothetical protein-3e-32At1g16540ABA3 (ABA DEFICIENT 3)S.X.H.G.
0.1626.9PtpAffx.204746.1.S1_atpmrna9342hypothetical protein-8e-20At3g19670protein bindingS.X.H.G.
0.1525.3PtpAffx.7210.1.A1_atCV225986hypothetical protein-7e-26At2g46260BTB/POZ domain-containing proteinS.X.H.G.
0.1525.3PtpAffx.204433.1.S1_atpmrna8709hypothetical protein-1e-6At3g43590zinc knuckle (CCHC-type) family proteinS.X.H.G.
0.1525.3PtpAffx.124319.1.S1_a_atCV256648hypothetical protein-2e-19At5g24810ABC1 family proteinS.X.H.G.
0.1321.6PtpAffx.17169.1.S1_atCV281839hypothetical protein-3e-1At4g21366ATP binding / protein tyrosine kinaseS.X.H.G.
0.1219.6PtpAffx.76140.1.A1_atCV243096--2e+0At2g23930SNRNP-G (PROBABLE SMALL NUCLEAR RIBONUCLEOPROTEIN G)S.X.H.G.
0.1016.3PtpAffx.31053.1.A1_s_atCV246650hypothetical protein-8e-40At5g54760eukaryotic translation initiation factor SUI1, putativeS.X.H.G.
0.0812.9PtpAffx.9325.3.A1_a_atCV261752hypothetical protein-1e-1At1g76300SmD3 (snRNP core protein SmD3)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.198.5GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
7.598.3GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
7.198.1GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
6.797.9GSM372100Clone3200_LPI5_N+_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
5.697.2GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
4.095.3GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
3.393.7GSM244432non infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.992.5GSM362890Clone1979_LPI5_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.791.8GSM372099Clone3200_LPI5_N+_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.791.8GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.5101142PtpAffx.10771.1.S1_a_atCV283492hypothetical protein-9e-50At1g75380wound-responsive protein-relatedC.G.S.X.
0.5101142PtpAffx.10771.1.S1_atCV283492hypothetical protein-9e-50At1g75380wound-responsive protein-relatedC.G.S.X.
0.441e-162573PtpAffx.10771.3.S1_atCX176575hypothetical protein-1e-85At1g75380wound-responsive protein-relatedC.G.S.X.
0.121e-1791PtpAffx.10771.6.A1_atCK095617hypothetical protein-7e-37At1g75380wound-responsive protein-relatedC.G.S.X.
0.032e-138PtpAffx.151874.1.A1_atBP930352hypothetical protein-3e-1At3g28870-C.G.S.X.
0.032e-138Ptp.6651.1.A1_atDN484709--5e-2At3g60830ATARP7 (ACTIN-RELATED PROTEIN 7)C.G.S.X.
0.016e-136PtpAffx.224897.1.S1_atpmrna43819hypothetical protein-3e-40At1g19440KCS4 (3-KETOACYL-COA SYNTHASE 4)C.G.S.X.
0.026e-136PtpAffx.214431.1.S1_atpmrna28064amino acid transporter-6e-1At3g28960amino acid transporter family proteinC.G.S.X.
0.036e-136PtpAffx.109739.1.S1_s_atCK106498hypothetical protein-4e-6At1g19440KCS4 (3-KETOACYL-COA SYNTHASE 4)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.323e-51202Arabidopsis thalianaAt1g75380843874wound-responsive protein-relatedF:unknown;P:unknown;C:unknown;BOPA---C.G.S.X.
0.223e-46186Glycine maxGmaAffx.3619.1.S1_atBQ785103--5e-76At1g75380wound-responsive protein-relatedC.G.S.X.
0.038e-134Hordeum vulgareContig4701_atContig4701--2e-1At1g19660wound-responsive family proteinC.G.S.X.
0.076e-550Oryza sativaOs08g0357000BQ905925-Conserved hypothetical protein3e+1At4g01340CHP-rich zinc finger protein-relatedC.G.S.X.
0.037e+032Triticum aestivumTaAffx.84746.1.S1_atCA629900--3e+0At4g00210LBD31 (LOB DOMAIN-CONTAINING PROTEIN 31)C.G.S.X.
0.238e-77286Vitis vinifera1621693_atBQ792185hypothetical protein LOC100248963-5e-73At1g75380wound-responsive protein-relatedC.G.S.X.
0.111e-550Zea maysZm.3656.1.A1_atAY106382.1Wound responsive protein-like-2e-1At1g75380wound-responsive protein-relatedC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage