CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID PtpAffx.10771.1.S1_a_at

Gene name hypothetical protein

Organism Populus trichocarpa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 91.1 PtpAffx.10771.1.S1_a_at CV283492 hypothetical protein - 9e-50 At1g75380 wound-responsive protein-related S.X. H.G.
0.60 86.0 PtpAffx.52012.1.A1_at CV276916 hypothetical protein - 1e+0 At2g46225 ABIL1 (Abi-1-like 1) S.X. H.G.
0.36 61.6 PtpAffx.208679.1.S1_at pmrna17213 hypothetical protein - 5e-8 At1g70590 F-box family protein S.X. H.G.
0.33 57.5 PtpAffx.12605.2.A1_at CV232092 hypothetical protein - 3e-14 At1g43900 protein phosphatase 2C, putative / PP2C, putative S.X. H.G.
0.32 55.2 PtpAffx.102162.1.A1_at BP933085 - - 4e+0 At4g18890 brassinosteroid signalling positive regulator-related S.X. H.G.
0.27 47.1 PtpAffx.1371.1.A1_at CV228380 hypothetical protein - 4e+0 At4g24700 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.9 95.1 GSM327403 Populus balsamifera_20071015_Etiolated_seedling_6d_3 GSE13990 Populus balsamifera developmental tissue series
3.9 95.1 GSM327400 Populus balsamifera_20071015_Etiolated_seedling_6d_1 GSE13990 Populus balsamifera developmental tissue series
3.6 94.5 GSM334226 Populus balsamifera_1006_mature_leaf_midday_3 GSE13990 Populus balsamifera developmental tissue series
3.4 94.0 GSM244430 non infected tissue, biological rep1 GSE9673 Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.4 94.0 GSM372043 Clone1979_LPI5_N-_8w_rep2 GSE14515 Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.1 93.2 GSM244432 non infected tissue, biological rep3 GSE9673 Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.9 92.5 GSM327402 Populus balsamifera_20071015_Etiolated_seedling_6d_2 GSE13990 Populus balsamifera developmental tissue series
2.9 92.5 GSM327281 Populus balsamifera_20071015_Seedling_continuous_light_6d_1 GSE13990 Populus balsamifera developmental tissue series
2.8 92.1 GSM334225 Populus balsamifera_1006_mature_leaf_midday_2 GSE13990 Populus balsamifera developmental tissue series
2.7 91.8 GSM327358 Populus balsamifera_20071015_Seedling_continuous_light_6d_2 GSE13990 Populus balsamifera developmental tissue series
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.96 0 2870 PtpAffx.10771.1.S1_at CV283492 hypothetical protein - 9e-50 At1g75380 wound-responsive protein-related C.G. S.X.
0.51 0 1142 PtpAffx.10771.5.S1_at CV236361 hypothetical protein - 3e-51 At1g75380 wound-responsive protein-related C.G. S.X.
0.50 4e-164 579 PtpAffx.10771.3.S1_at CX176575 hypothetical protein - 1e-85 At1g75380 wound-responsive protein-related C.G. S.X.
0.42 1e-117 424 PtpAffx.10771.2.S1_s_at CV239239 hypothetical protein - 2e-24 At1g75380 wound-responsive protein-related C.G. S.X.
0.42 1e-117 424 PtpAffx.10771.2.S1_at CV239239 hypothetical protein - 2e-24 At1g75380 wound-responsive protein-related C.G. S.X.
0.45 3e-109 397 PtpAffx.10771.4.S1_at BU894833 hypothetical protein - 2e-28 At1g75380 wound-responsive protein-related C.G. S.X.
0.42 1e-68 262 PtpAffx.10771.6.A1_at CK095617 hypothetical protein - 7e-37 At1g75380 wound-responsive protein-related C.G. S.X.
0.02 3e-1 38 PtpAffx.45956.1.S1_s_at CF235664 hypothetical protein - 2e-11 At3g53020 STV1 (SHORT VALVE1) C.G. S.X.
0.01 1e+0 36 PtpAffx.8674.1.S1_at CK090655 hypothetical protein - 2e-3 At2g33510 protein binding C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.40 9e-50 198 Arabidopsis thaliana At1g75380 843874 wound-responsive protein-related F:unknown;P:unknown;C:unknown;BOPA - - - C.G. S.X.
0.26 8e-45 182 Glycine max GmaAffx.3619.1.S1_at BQ785103 - - 5e-76 At1g75380 wound-responsive protein-related C.G. S.X.
0.05 3e-2 40 Hordeum vulgare Contig4701_at Contig4701 - - 2e-1 At1g19660 wound-responsive family protein C.G. S.X.
0.06 4e-7 57 Oryza sativa Os08g0357000 BQ905925 - Conserved hypothetical protein 3e+1 At4g01340 CHP-rich zinc finger protein-related C.G. S.X.
0.02 3e+0 34 Triticum aestivum TaAffx.81784.1.S1_at CA681932 - - 2e+0 At2g42990 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.35 2e-75 282 Vitis vinifera 1621693_at BQ792185 hypothetical protein LOC100248963 - 5e-73 At1g75380 wound-responsive protein-related C.G. S.X.
0.07 2e-5 50 Zea mays Zm.3656.1.A1_at AY106382.1 Wound responsive protein-like - 2e-1 At1g75380 wound-responsive protein-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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