Gene omics information

Query gene ID	PtpAffx.104546.1.S1_at
Gene name	potassium efflux antiporter
Organism	Populus trichocarpa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.53	80.5	PtpAffx.104546.1.S1_at	CV250441	potassium efflux antiporter	-	9e-43	At5g51710	KEA5	S.X.	H.G.	Please selecteFP Browser (expression)
0.52	79.4	PtpAffx.204876.1.S1_s_at	pmrna9637	hypothetical protein	-	3e-127	At5g12480	CPK7 (calmodulin-domain protein kinase 7)	S.X.	H.G.	Please selecteFP Browser (expression)
0.50	78.6	Ptp.2113.1.S1_at	CK088598	hypothetical protein	-	6e-15	At3g23980	unknown protein	S.X.	H.G.	Please selecteFP Browser (expression)
0.48	75.4	PtpAffx.88257.1.S1_at	CV274540	hypothetical protein	-	6e-3	At3g56640	exocyst complex subunit Sec15-like family protein	S.X.	H.G.	Please selecteFP Browser (expression)
0.44	71.9	PtpAffx.200217.1.S1_at	pmrna406	hypothetical protein	-	3e-15	At3g24040	glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein	S.X.	H.G.	Please selecteFP Browser (expression)
0.40	67.0	PtpAffx.8815.2.A1_a_at	CV233643	ABC transporter family protein	-	3e-14	At5g39040	ATTAP2	S.X.	H.G.	Please selecteFP Browser (expression)
0.38	63.7	Ptp.2697.1.S1_at	CK092312	hypothetical protein	-	1e-91	At1g50140	ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding	S.X.	H.G.	Please selecteFP Browser (expression)
0.35	59.7	PtpAffx.37764.1.S1_at	CV240189	hypothetical protein	-	5e-14	At3g26950	unknown protein	S.X.	H.G.	Please selecteFP Browser (expression)
0.29	50.5	PtpAffx.142714.1.S1_at	CX658989	hypothetical protein	-	8e-6	At3g11950	prenyltransferase/ zinc ion binding	S.X.	H.G.	Please selecteFP Browser (expression)
0.22	38.3	PtpAffx.128785.1.S1_s_at	CV266656	hypothetical protein	-	3e-21	At1g13860	dehydration-responsive protein-related	S.X.	H.G.	Please selecteFP Browser (expression)

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
10.1	99.0	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
9.2	98.8	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
5.1	96.8	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series
4.8	96.4	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.4	94.0	GSM328105	Populus x canescens leaf hypoxia_rep_01	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.9	92.5	GSM328062	Populus x canescens leaf control_rep_02	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.6	91.3	GSM328066	Populus x canescens leaf control_rep_04	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.5	90.9	GSM328070	Populus x canescens leaf control_rep_05	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.3	89.8	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM328059	Populus x canescens leaf control_rep_01	GSE13109	Effect of hypoxia on gene expression in Grey poplar

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.50	0	1178	PtpAffx.210785.1.S1_at	pmrna21161	potassium efflux antiporter	-	6e-135	At5g51710	KEA5	C.G.	S.X.	Please selecteFP Browser (expression)
0.35	2e-100	367	PtpAffx.104546.2.S1_s_at	BU809217	potassium efflux antiporter	-	2e-8	At2g19600	ATKEA4	C.G.	S.X.	Please selecteFP Browser (expression)
0.35	2e-100	367	PtpAffx.104546.2.S1_at	BU809217	potassium efflux antiporter	-	2e-8	At2g19600	ATKEA4	C.G.	S.X.	Please selecteFP Browser (expression)
0.12	2e-13	77	PtpAffx.214069.1.S1_s_at	pmrna27400	potassium efflux antiporter /// potassium efflux antiporter	-	6e-91	At5g11800	KEA6	C.G.	S.X.	Please selecteFP Browser (expression)
0.12	2e-13	77	PtpAffx.214069.1.S1_at	pmrna27400	potassium efflux antiporter	-	6e-91	At5g11800	KEA6	C.G.	S.X.	Please selecteFP Browser (expression)
0.05	1e-8	61	PtpAffx.206686.1.S1_at	pmrna13265	potassium efflux antiporter	-	6e-156	At5g11800	KEA6	C.G.	S.X.	Please selecteFP Browser (expression)
0.06	3e-3	44	PtpAffx.65086.1.A1_at	CK095189	-	-	7e-1	At2g10560	unknown protein	C.G.	S.X.	Please selecteFP Browser (expression)
0.02	3e+0	34	PtpAffx.29457.1.S1_s_at	CV231417	hypothetical protein	-	9e-37	At2g25520	phosphate translocator-related	C.G.	S.X.	Please selecteFP Browser (expression)
0.01	3e+0	34	PtpAffx.224311.1.S1_at	pmrna42744	-	-	2e-66	At5g52640	ATHSP90.1 (HEAT SHOCK PROTEIN 90.1)	C.G.	S.X.	Please selecteFP Browser (expression)

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.18	9e-43	174	Arabidopsis thaliana	At5g51710	835245	KEA5	member of Putative potassium proton antiporter family	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	3e+0	34	Glycine max	HgAffx.17446.1.S1_at	CB278910	-	-	3e+0	At1g11180	secretory carrier membrane protein (SCAMP) family protein	C.G.	S.X.	Please select
0.23	3e-10	65	Hordeum vulgare	Contig14465_at	Contig14465	-	-	3e-22	At5g11800	KEA6	C.G.	S.X.	Please select
0.14	5e-18	93	Oryza sativa	Os06g0561200	AK120422.1	-	Potassium/proton antiporter-like protein	5e-31	At2g19600	ATKEA4	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	2e+0	34	Triticum aestivum	Ta.16847.1.S1_at	CA613713	-	-	2e-4	At3g06080	unknown protein	C.G.	S.X.	Please select
0.02	3e+0	32	Vitis vinifera	1614489_at	CB974585	-	-	9e-6	At2g45960	PIP1B (NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1B)	C.G.	S.X.	Please select
0.05	4e+0	32	Zea mays	Zm.7610.1.A1_at	BM079177	hypothetical protein LOC100279299	-	5e+0	At1g16060	ovule development protein, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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