Gene omics information

Query gene ID Ptp.925.1.A1_at
Gene name methionine sulfoxide reductase type
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1Ptp.925.1.A1_atCK089498methionine sulfoxide reductase type-5e-10At4g25130peptide methionine sulfoxide reductase, putativeS.X.H.G.
0.5683.9PtpAffx.16547.1.A1_a_atCV257887hypothetical protein-4e-100At2g43750OASB (O-ACETYLSERINE (THIOL) LYASE B)S.X.H.G.
0.5380.5PtpAffx.208261.1.S1_atpmrna16441hypothetical protein-6e-3At3g26085CAAX amino terminal protease family proteinS.X.H.G.
0.4067.0Ptp.2741.1.S1_s_atDN490824hypothetical protein-1e-94At1g21640NADK2S.X.H.G.
0.4067.0PtpAffx.31479.1.S1_a_atAJ767275hypothetical protein-7e-3At1g11910aspartyl protease family proteinS.X.H.G.
0.4067.0Ptp.6060.1.S1_atDN490099hypothetical protein-9e-161At1g06430FTSH8S.X.H.G.
0.3559.7PtpAffx.121212.1.A1_atCV249010--3e-5At1g30570protein kinase family proteinS.X.H.G.
0.3559.7PtpAffx.58699.1.A1_s_atCK094569hypothetical protein-2e-20At3g26580-S.X.H.G.
0.3357.5PtpAffx.203291.1.S1_atpmrna6522hypothetical protein-1e-13At4g11110SPA2 (SPA1-RELATED 2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.597.1GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
4.796.3GSM372097Clone3200_LPI5_N-_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.495.9GSM244431non infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.295.6GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.195.5GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.794.7GSM244430non infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.393.7GSM244435Mlp infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.393.7GSM372100Clone3200_LPI5_N+_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.293.5GSM244438Mmd infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.092.9GSM244439Mixed infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.7301029PtpAffx.794.1.S1_s_atAY530805.1methionine sulfoxide reductase type-1e-11At4g25130peptide methionine sulfoxide reductase, putativeC.G.S.X.
0.026e-136PtpAffx.51641.2.S1_atCN192827mitochondrial phosphate carrier protein /// mitochondrial phosphate carrier protein-1e-56At5g14040mitochondrial phosphate transporterC.G.S.X.
0.026e-136PtpAffx.223426.1.S1_atpmrna41429mitochondrial phosphate carrier protein-2e-74At5g14040mitochondrial phosphate transporterC.G.S.X.
0.026e-136PtpAffx.217230.1.S1_atpmrna32414hypothetical protein-8e+0At3g13390sks11 (SKU5 Similar 11)C.G.S.X.
0.036e-136PtpAffx.214516.1.S1_s_atpmrna28227hypothetical protein-7e-3At5g13190-C.G.S.X.
0.016e-136PtpAffx.211497.1.S1_atpmrna22531hypothetical protein-2e-23At3g61140FUS6 (FUSCA 6)C.G.S.X.
0.026e-136PtpAffx.136353.2.S1_s_atBU897289hypothetical protein-1e-13At3g61140FUS6 (FUSCA 6)C.G.S.X.
0.012e+034PtpAffx.224182.1.S1_atpmrna42482hypothetical protein-5e-8At1g78270AtUGT85A4 (UDP-glucosyl transferase 85A4)C.G.S.X.
0.022e+034PtpAffx.212831.1.S1_atpmrna25116jumonji domain protein-7e-34At3g48430REF6 (RELATIVE OF EARLY FLOWERING 6)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.235e-1065Arabidopsis thalianaAt4g25130828616peptide methionine sulfoxide reductase, putativeF:peptide-methionine-(S)-S-oxide reductase activity, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor;P:protein modification process, protein metabolic process;C:chloroplast stroma, chloroplast;OBMPFAV---C.G.S.X.
0.281e-48194Glycine maxGma.2339.1.S1_atCD393491--5e-26At5g07470PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3)C.G.S.X.
0.181e-1893Hordeum vulgareContig7267_atContig7267--1e-3At5g07460PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2)C.G.S.X.
0.142e-1171Oryza sativaOs10g0563600AK109715.1-Peptide methionine sulfoxide reductase (EC1.8.4.6) (Protein- methionine-S-oxide reductase) (PeptideMet(O) reductase)2e-1At3g47550zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.083e-240Triticum aestivumTa.8368.1.S1_atCK207647--2e+0At5g07460PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2)C.G.S.X.
0.254e-57220Vitis vinifera1608888_atCF208466hypothetical protein LOC100258013-2e-13At4g25130peptide methionine sulfoxide reductase, putativeC.G.S.X.
0.112e-1065Zea maysZm.13703.1.A1_atCF007380peptide methionine sulfoxide reductase-9e-3At5g61640PMSR1 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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