CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ptp.820.1.A1_at

Gene name hypothetical protein

Organism Populus trichocarpa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.39 64.6 Ptp.820.1.A1_at BI068635 hypothetical protein - 6e-13 At1g18070 EF-1-alpha-related GTP-binding protein, putative S.X. H.G.
0.75 94.1 PtpAffx.13176.5.S1_at CF232111 hypothetical protein - 6e+0 At5g11080 ubiquitin family protein S.X. H.G.
0.67 91.1 Ptp.1741.1.A1_at CK093530 hypothetical protein - 1e+0 At1g72660 developmentally regulated GTP-binding protein, putative S.X. H.G.
0.57 84.2 Ptp.5796.1.S1_at CK087882 - - 1e+0 At4g04190 unknown protein S.X. H.G.
0.48 75.4 PtpAffx.28224.2.S1_a_at DN490078 hypothetical protein - 2e-78 At2g32260 cholinephosphate cytidylyltransferase, putative / phosphorylcholine transferase, putative / CTP:phosphocholine cytidylyltransferase, putative S.X. H.G.
0.43 69.7 Ptp.6987.1.S1_at DN489050 - - 2e+0 At1g32370 TOM2B (TOBAMOVIRUS MULTIPLICATION 2B) S.X. H.G.
0.40 67.0 Ptp.6871.1.S1_at BU830941 hypothetical protein - 1e+0 At4g34190 SEP1 (STRESS ENHANCED PROTEIN 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
10.3 99.0 GSM328567 Populus x canescens root hypoxia_rep_09 GSE13109 Effect of hypoxia on gene expression in Grey poplar
8.6 98.6 GSM328564 Populus x canescens root hypoxia_rep_06 GSE13109 Effect of hypoxia on gene expression in Grey poplar
7.0 98.0 GSM328565 Populus x canescens root hypoxia_rep_07 GSE13109 Effect of hypoxia on gene expression in Grey poplar
5.3 96.9 GSM328562 Populus x canescens root hypoxia_rep_04 GSE13109 Effect of hypoxia on gene expression in Grey poplar
4.1 95.5 GSM328532 Populus x canescens root hypoxia_rep_02 GSE13109 Effect of hypoxia on gene expression in Grey poplar
3.6 94.5 GSM328560 Populus x canescens root control_rep_11 GSE13109 Effect of hypoxia on gene expression in Grey poplar
3.5 94.3 GSM328284 Populus x canescens root control_rep_03 GSE13109 Effect of hypoxia on gene expression in Grey poplar
3.4 94.0 GSM328285 Populus x canescens root control_rep_04 GSE13109 Effect of hypoxia on gene expression in Grey poplar
3.1 93.2 GSM328561 Populus x canescens root control_rep_12 GSE13109 Effect of hypoxia on gene expression in Grey poplar
3.0 92.9 GSM328563 Populus x canescens root hypoxia_rep_05 GSE13109 Effect of hypoxia on gene expression in Grey poplar
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.35 0 777 PtpAffx.70877.1.S1_at CK091176 hypothetical protein - 3e-112 At1g18070 EF-1-alpha-related GTP-binding protein, putative C.G. S.X.
0.02 7e-1 36 PtpAffx.24755.1.A1_at CV247013 hypothetical protein - 1e+0 At4g22370 unknown protein C.G. S.X.
0.01 7e-1 36 PtpAffx.223159.1.S1_at pmrna41022 hypothetical protein - 1e+1 At5g35230 unknown protein C.G. S.X.
0.01 7e-1 36 PtpAffx.203842.1.S1_at pmrna7585 cytochrome P450 - 2e-4 At2g22330 CYP79B3 C.G. S.X.
0.02 7e-1 36 Ptp.3920.2.S1_s_at CV275477 - - 3e-2 At2g29480 ATGSTU2 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 2) C.G. S.X.
0.01 3e+0 34 PtpAffx.213054.1.S1_at pmrna25546 ABC transporter family protein - 3e-13 At4g25450 ATNAP8 C.G. S.X.
0.02 3e+0 34 PtpAffx.208039.1.S1_at pmrna15959 hypothetical protein - 8e-13 At1g15160 MATE efflux family protein C.G. S.X.
0.01 3e+0 34 PtpAffx.204385.1.S1_at pmrna8609 hypothetical protein - 1e-8 At1g20590 cyclin, putative C.G. S.X.
0.01 3e+0 34 PtpAffx.201294.1.S1_at pmrna2570 hypothetical protein - 2e-8 At5g55860 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 6e-13 75 Arabidopsis thaliana At1g18070 838387 EF-1-alpha-related GTP-binding protein, putative F:translation factor activity, nucleic acid binding, GTP binding, translation release factor activity, GTPase activity;P:translational termination;C:vacuole;BMOFPA - - - C.G. S.X.
0.35 3e-52 206 Glycine max Gma.6450.1.S1_at CD401012 - - 6e-22 At1g18070 EF-1-alpha-related GTP-binding protein, putative C.G. S.X.
0.20 6e-8 57 Hordeum vulgare Contig10496_at Contig10496 - - 1e-17 At1g18070 EF-1-alpha-related GTP-binding protein, putative C.G. S.X.
0.10 1e-6 56 Oryza sativa Os02g0456200 9630.m02430 - G1 to S phase transition protein 1 homolog 1e-33 At1g18070 EF-1-alpha-related GTP-binding protein, putative C.G. S.X.
0.18 9e-9 61 Triticum aestivum Ta.7532.2.S1_at CD928299 GTP-binding protein - 2e-29 At1g18070 EF-1-alpha-related GTP-binding protein, putative C.G. S.X.
0.28 2e-68 258 Vitis vinifera 1619744_at CF208885 hypothetical protein LOC100249117 - 2e-94 At1g18070 EF-1-alpha-related GTP-binding protein, putative C.G. S.X.
0.14 1e-14 79 Zea mays Zm.7074.2.A1_at CK368645 - - 1e-2 At1g18070 EF-1-alpha-related GTP-binding protein, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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