Gene omics information

Query gene ID Ptp.759.1.S1_at
Gene name tubulin alpha-7 chain
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1Ptp.759.1.S1_atCV259673tubulin alpha-7 chain-1e-82At4g14960TUA6S.X.H.G.
0.8296.3PtpAffx.2265.10.A1_a_atCV246443hypothetical protein-2e-4At1g20693HMGB2 (HIGH MOBILITY GROUP B 2)S.X.H.G.
0.8196.1PtpAffx.86796.1.A1_atDN490220hypothetical protein-1e-14At2g26180IQD6 (IQ-domain 6)S.X.H.G.
0.7794.9Ptp.6857.2.S1_s_atCA923790hypothetical protein-1e-1At4g35620CYCB2S.X.H.G.
0.7694.3PtpAffx.210026.1.S1_atpmrna19760hypothetical protein-1e-4At4g38070bHLH family proteinS.X.H.G.
0.7393.6PtpAffx.128825.2.S1_a_atCK096703hypothetical protein-4e-7At5g67270ATEB1C (microtubule end binding protein 1)S.X.H.G.
0.6991.5Ptp.4412.2.S1_s_atCV237391hypothetical protein-1e-57At2g25880AtAUR2 (AtAurora2)S.X.H.G.
0.6791.1PtpAffx.201265.1.S1_atpmrna2509hypothetical protein-5e-7At3g20150kinesin motor family proteinS.X.H.G.
0.6791.1Ptp.6857.1.S1_s_atBU833205hypothetical protein-6e-9At1g20590cyclin, putativeS.X.H.G.
0.6791.1PtpAffx.200879.1.S1_atpmrna1723hypothetical protein-2e-6At2g26760CYCB1S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.298.8GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
7.198.1GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
7.198.1GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
6.998.0GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
5.096.6GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
4.996.5GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
4.596.1GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
4.596.1GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
3.894.9GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
3.794.7GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.602e-175617Ptp.1787.1.S1_s_atCV225870tubulin alpha-5 chain-0At4g14960TUA6C.G.S.X.
0.602e-129464Ptp.1895.1.S1_atAY229881.1--0At1g50010TUA2C.G.S.X.
0.343e-84313PtpAffx.692.3.A1_atCV275152tubulin alpha-5 chain-8e-157At1g04820TUA4C.G.S.X.
0.344e-68260Ptp.2416.2.S1_s_atCV230713tubulin alpha-3 chain-9e-166At4g14960TUA6C.G.S.X.
0.567e-61236PtpAffx.148282.1.S1_s_atAJ779144tubulin alpha-1 chain-1e-135At1g04820TUA4C.G.S.X.
0.567e-61236PtpAffx.148282.1.S1_atAJ779144--1e-135At1g04820TUA4C.G.S.X.
0.203e-35151Ptp.2416.1.A1_atCV226264tubulin alpha-3 chain-9e-91At4g14960TUA6C.G.S.X.
0.123e-29131PtpAffx.207089.1.S1_atpmrna14052--1e-9At1g04820TUA4C.G.S.X.
0.204e-1997PtpAffx.108443.1.A1_atCV240362--2e-22At1g50010TUA2C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.651e-82307Arabidopsis thalianaAt4g14960827154TUA6Encodes an alpha-tubulin isoform required for right handed helical growth.---C.G.S.X.
0.511e-89331Glycine maxGma.16674.1.S1_s_atAW350953--0At1g50010TUA2C.G.S.X.
0.431e-1687Hordeum vulgareContig902_x_atContig902--0At1g50010TUA2C.G.S.X.
0.434e-35151Oryza sativaOs11g0247300AK105080.1-Tubulin alpha-1 chain (Alpha-1 tubulin)0At1g50010TUA2C.G.S.X.
0.582e-100367Triticum aestivumTa.812.4.S1_atBJ237929alpha tubulin-3A-0At1g50010TUA2C.G.S.X.
0.608e-125446Vitis vinifera1618413_atBQ797853hypothetical protein LOC100256600-0At4g14960TUA6C.G.S.X.
0.533e-91335Zea maysZm.16535.2.A1_s_atCF062633hypothetical protein LOC100276314-0At1g50010TUA2C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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