Gene omics information

Query gene ID Ptp.7060.1.A1_x_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1Ptp.7060.1.A1_x_atCV262139hypothetical protein-9e-27At1g23290RPL27ABS.X.H.G.
0.6791.1PtpAffx.30368.1.S1_atCV254627hypothetical protein-1e-1At1g76180ERD14 (EARLY RESPONSE TO DEHYDRATION 14)S.X.H.G.
0.5582.2PtpAffx.12741.1.A1_atCV234093--8e-2At4g08230glycine-rich proteinS.X.H.G.
0.4369.7PtpAffx.7528.1.S1_atCV270873hypothetical protein-6e-10At4g35980unknown proteinS.X.H.G.
0.4067.0Ptp.3625.1.A1_atCV267089hypothetical protein-2e-12At3g07560PEX13 (PEROXIN 13)S.X.H.G.
0.3559.7Ptp.6541.1.S1_a_atCV227360hypothetical protein-1e-32At1g63290ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putativeS.X.H.G.
0.2034.6PtpAffx.108603.1.A1_s_atCV279639hypothetical protein-8e-1At5g59420ORP3C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3C)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.494.0GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.892.1GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.590.9GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.188.6GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
2.088.0GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.088.0GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
2.088.0GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
1.886.4GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
1.886.4GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
1.886.4GSM327358Populus balsamifera_20071015_Seedling_continuous_light_6d_2GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9601513Ptp.7060.1.A1_atCV262139hypothetical protein-9e-27At1g23290RPL27ABC.G.S.X.
0.9601513Ptp.7060.1.A1_s_atCV262139hypothetical protein-9e-27At1g23290RPL27ABC.G.S.X.
0.690823PtpAffx.12741.2.A1_atCV273182hypothetical protein-4e+0At4g12590unknown proteinC.G.S.X.
0.509e-142504PtpAffx.12741.1.A1_atCV234093--8e-2At4g08230glycine-rich proteinC.G.S.X.
0.529e-142504PtpAffx.12741.1.A1_a_atCV234093hypothetical protein-8e-2At4g08230glycine-rich proteinC.G.S.X.
0.242e-114412Ptp.3130.1.S1_s_atCV226409hypothetical protein-5e-53At1g70600structural constituent of ribosomeC.G.S.X.
0.248e-99361Ptp.1851.1.S1_x_atCV250325hypothetical protein-8e-58At1g70600structural constituent of ribosomeC.G.S.X.
0.248e-99361Ptp.1851.1.S1_s_atCV250325hypothetical protein-8e-58At1g70600structural constituent of ribosomeC.G.S.X.
0.266e-78291PtpAffx.2771.1.S1_atCV248925hypothetical protein-4e-34At1g70600structural constituent of ribosomeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.189e-27121Arabidopsis thalianaAt1g23290838938RPL27ABEncodes a ribosomal protein L27A, a constituent of the large subunit of the ribosomal complex. Regulated by TCP20.---C.G.S.X.
0.225e-29129Glycine maxGma.5710.1.S1_atAI442566--7e-5At4g08230glycine-rich proteinC.G.S.X.
0.142e-26119Hordeum vulgareContig2352_atContig2352--6e-31At1g23290RPL27ABC.G.S.X.
0.154e-21103Oryza sativaOsAffx.3363.1.S1_at---0C.G.S.X.
0.156e-28125Triticum aestivumTaAffx.115066.2.S1_atCA618856--4e-28At1g70600structural constituent of ribosomeC.G.S.X.
0.331e-60232Vitis vinifera1622126_atCF568916--7e-8At4g08230glycine-rich proteinC.G.S.X.
0.134e-33141Zea maysZm.16909.2.A1_atAI64944360S ribosomal protein L27a-3-6e-31At1g70600structural constituent of ribosomeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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