Gene omics information

Query gene ID Ptp.6822.1.S1_at
Gene name
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6086.0Ptp.6822.1.S1_atDN500216--5e+0At5g26740unknown proteinS.X.H.G.
0.5582.2PtpAffx.77707.1.A1_atCK097241--4e-1At1g33910avirulence-responsive family protein / avirulence induced gene (AIG1) family proteinS.X.H.G.
0.5078.6Ptp.7603.1.S1_atDN494879--6e-2At1g31120KUP10S.X.H.G.
0.2747.1PtpAffx.26481.1.S1_a_atBU869849hypothetical protein-3e-30At1g33490unknown proteinS.X.H.G.
0.2340.5Ptp.7659.1.S1_atDN488737hypothetical protein-2e-12At3g15410leucine-rich repeat family proteinS.X.H.G.
0.2034.6Ptp.3446.1.S1_atDN502970hypothetical protein-1e-1At3g11773electron carrier/ protein disulfide oxidoreductaseS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.396.9GSM328059Populus x canescens leaf control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
4.796.3GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
4.395.8GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
4.195.5GSM328077Populus x canescens leaf control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
3.995.1GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
3.894.9GSM328063Populus x canescens leaf control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
3.894.9GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
3.794.7GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
3.594.3GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
3.293.5GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.361e-44180PtpAffx.128559.3.A1_a_atDN491414hypothetical protein-2e-12At3g05940unknown proteinC.G.S.X.
0.232e-654Ptp.1691.1.S1_atCK092979--7e-2At3g31960-C.G.S.X.
0.033e-240PtpAffx.46068.1.A1_a_atCV242864hypothetical protein-9e-21At5g05830zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.032e+034PtpAffx.56064.1.A1_atCV280271--6e-6At2g31200ADF6 (ACTIN DEPOLYMERIZING FACTOR 6)C.G.S.X.
0.022e+034PtpAffx.5366.2.A1_atCK090447hypothetical protein-1e-51At1g11750CLPP6C.G.S.X.
0.032e+034PtpAffx.2072.2.A1_atCK091188hypothetical protein-1e+0At5g17670hydrolase, acting on ester bondsC.G.S.X.
0.042e+034PtpAffx.205055.1.S1_atpmrna10015hypothetical protein-1e-2At5g67390unknown proteinC.G.S.X.
0.012e+034PtpAffx.203735.1.S1_atpmrna7381hypothetical protein-9e-15At1g61690phosphoinositide bindingC.G.S.X.
0.012e+034PtpAffx.203543.1.S1_atpmrna7034hypothetical protein-1e+0At3g56580zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.055e+032Arabidopsis thalianaAt5g26740832714unknown proteinF:unknown;P:unknown;C:endomembrane system;MPFO---C.G.S.X.
0.077e-342Glycine maxGma.6819.1.A1_atBE821975--4e-3At3g05940unknown proteinC.G.S.X.
0.041e-136Hordeum vulgareHT07O12u_s_atHT07O12u--1e+1At5g45469unknown proteinC.G.S.X.
0.022e+034Oryza sativaOs.52473.1.S1_at---0C.G.S.X.
0.033e-136Triticum aestivumTa.7563.2.S1_atCN012909--3e-1At4g28840unknown proteinC.G.S.X.
0.101e-756Vitis vinifera1610842_a_atCB969447hypothetical protein LOC100244638-1e+0At4g27280calcium-binding EF hand family proteinC.G.S.X.
0.022e+032Zea maysZm.6300.1.S1_atAI691313ATBRCA1-7e+0At3g03870unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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