Gene omics information

Query gene ID Ptp.670.1.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5582.2Ptp.670.1.A1_atCK087317hypothetical protein-6e-1At5g14740CA2 (CARBONIC ANHYDRASE 2)S.X.H.G.
0.6086.0PtpAffx.202897.1.S1_atpmrna5733hypothetical protein-3e-6At3g13980unknown proteinS.X.H.G.
0.4471.9PtpAffx.95850.1.A1_atCV230444hypothetical protein-4e-1At5g25560zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.4067.0PtpAffx.4889.5.A1_atCV267649--3e-5At3g62930glutaredoxin family proteinS.X.H.G.
0.4067.0PtpAffx.223136.1.S1_atpmrna40986hypothetical protein-5e-18At1g49050aspartyl protease family proteinS.X.H.G.
0.3863.7PtpAffx.21178.1.S1_atBU887045hypothetical protein-1e+0At5g61210SNAP33 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
52.1100.0GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
5.497.0GSM244430non infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.594.3GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
3.193.2GSM244431non infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.389.8GSM244436Mmd infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.088.0GSM244435Mlp infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
1.886.4GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue series
1.785.5GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
1.785.5GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
1.583.5GSM244432non infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.238e-78289PtpAffx.214358.1.S1_atpmrna27926hypothetical protein-5e-1At2g44970lipase-relatedC.G.S.X.
0.041e-240PtpAffx.24172.1.S1_atCV282662hypothetical protein-2e-6At3g44020thylakoid lumenal P17.1 proteinC.G.S.X.
0.031e-240PtpAffx.116400.1.S1_atCK094479--2e-6At2g44970lipase-relatedC.G.S.X.
0.028e-134PtpAffx.222021.1.S1_atpmrna39212hypothetical protein-6e-5At1g53830ATPME2C.G.S.X.
0.028e-134PtpAffx.212247.1.S1_atpmrna24010hypothetical protein-2e-1At2g19060GDSL-motif lipase/hydrolase family proteinC.G.S.X.
0.018e-134PtpAffx.212088.1.S1_s_atpmrna23715DNA methyltransferase /// DNA methyltransferase-3e-49At5g49160MET1 (METHYLTRANSFERASE 1)C.G.S.X.
0.018e-134PtpAffx.212088.1.S1_atpmrna23715DNA methyltransferase-3e-49At5g49160MET1 (METHYLTRANSFERASE 1)C.G.S.X.
0.038e-134PtpAffx.211080.1.S1_atpmrna21766hypothetical protein-3e-23At2g03090ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15)C.G.S.X.
0.028e-134PtpAffx.206805.1.S1_atpmrna13510hypothetical protein-6e-5At1g53830ATPME2C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.036e-134Arabidopsis thalianaAt5g14740831326CA2 (CARBONIC ANHYDRASE 2)Encodes a beta carbonic anhydrase likely to be localized in the cytoplasm. Expression of its mRNA is seen in etiolated seedlings and points to a possible nonphotosynthetic role for this isoform.---C.G.S.X.
0.052e-136Glycine maxGma.11884.1.A1_atBE824087--7e-1At5g49610F-box family proteinC.G.S.X.
0.044e+030Hordeum vulgareContig20178_atContig20178--7e-1At3g21200unknown proteinC.G.S.X.
0.061e+034Oryza sativaOsAffx.8353.1.S1_at---0C.G.S.X.
0.052e+032Triticum aestivumTaAffx.28833.1.S1_s_atCA655690--2e-1At2g42000plant EC metallothionein-like family 15 proteinC.G.S.X.
0.052e-134Vitis vinifera1608598_atBQ797716--1e-18At5g27600LACS7 (LONG-CHAIN ACYL-COA SYNTHETASE 7)C.G.S.X.
0.044e+030Zea maysZm.12299.1.A1_atBQ620924ATP-dependent protease Clp ATPase subunit-4e+0At1g15760-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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