Gene omics information

Query gene ID Ptp.640.1.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5784.2Ptp.640.1.S1_s_atCX186020hypothetical protein-1e-21At2g06050OPR3 (OPDA-REDUCTASE 3)S.X.H.G.
0.6187.0PtpAffx.224310.1.S1_atpmrna42743hypothetical protein-1e-53At1g63700YDA (YODA)S.X.H.G.
0.5984.9PtpAffx.96723.1.S1_atCN518261hypothetical protein-2e-27At1g09010glycoside hydrolase family 2 proteinS.X.H.G.
0.5380.5PtpAffx.123365.1.S1_s_atBI139210hypothetical protein-3e-36At1g11910aspartyl protease family proteinS.X.H.G.
0.4471.9PtpAffx.145508.1.S1_atCN549687outward rectifying potassium channel-3e-4At5g55630ATKCO1S.X.H.G.
0.2136.5PtpAffx.212243.1.S1_atpmrna24003hypothetical protein-1e-26At4g08580-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.896.4GSM244436Mmd infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.796.3GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.696.2GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.596.1GSM244433Mlp infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.295.6GSM244435Mlp infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.195.5GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.694.5GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
3.594.3GSM244439Mixed infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.594.3GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.393.7GSM244430non infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.5301025Ptp.640.2.S1_s_atBU894839hypothetical protein-1e-16At2g06050OPR3 (OPDA-REDUCTASE 3)C.G.S.X.
0.510841PtpAffx.44935.1.A1_atCV268304hypothetical protein-2e-19At2g06050OPR3 (OPDA-REDUCTASE 3)C.G.S.X.
0.510841PtpAffx.44935.1.A1_a_atCV268304hypothetical protein-2e-19At2g06050OPR3 (OPDA-REDUCTASE 3)C.G.S.X.
0.155e-49196PtpAffx.44935.3.A1_atDN496114--9e-1At3g13403-C.G.S.X.
0.048e-1169PtpAffx.26497.1.S1_atCK105060--3e-52At1g76690OPR2C.G.S.X.
0.047e-550PtpAffx.2548.1.A1_atCV259452--4e-12At1g76690OPR2C.G.S.X.
0.051e-346PtpAffx.216720.1.S1_s_atpmrna31684hypothetical protein-1e-14At1g76690OPR2C.G.S.X.
0.031e-346PtpAffx.208369.1.S1_atpmrna16643hypothetical protein-3e-15At1g76680OPR1C.G.S.X.
0.027e-240PtpAffx.99162.1.S1_atCV279989hypothetical protein-1e+0At2g17870cold-shock DNA-binding family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.181e-21105Arabidopsis thalianaAt2g06050815160OPR3 (OPDA-REDUCTASE 3)Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence.---C.G.S.X.
0.336e-27123Glycine maxGmaAffx.6142.1.S1_atBU765938--3e-6At2g06050OPR3 (OPDA-REDUCTASE 3)C.G.S.X.
0.132e-654Hordeum vulgareContig9556_atContig9556--2e-4At2g06050OPR3 (OPDA-REDUCTASE 3)C.G.S.X.
0.152e-1585Oryza sativaOs08g0459600AK071203.1-12-oxophytodienoate reductase 3 (EC 1.3.1.42)2e-7At2g06050OPR3 (OPDA-REDUCTASE 3)C.G.S.X.
0.113e-344Triticum aestivumTa.8433.1.S1_atCD873985--2e-4At2g06050OPR3 (OPDA-REDUCTASE 3)C.G.S.X.
0.173e-1995Vitis vinifera1608502_atBQ794120hypothetical protein LOC100262732-1e-3At2g06050OPR3 (OPDA-REDUCTASE 3)C.G.S.X.
0.061e-654Zea maysZm.10676.1.S1_atCN84516312-oxo-phytodienoic acid reductase-2e-4At2g06050OPR3 (OPDA-REDUCTASE 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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