Gene omics information

Query gene ID Ptp.625.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8997.8Ptp.625.1.S1_atCK087324hypothetical protein-4e-60At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)S.X.H.G.
0.6287.2PtpAffx.45729.2.S1_atBU822004--8e-1At4g31800WRKY18S.X.H.G.
0.5784.2PtpAffx.39302.1.A1_atCK097884hypothetical protein-6e-1At4g14300heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putativeS.X.H.G.
0.5683.9PtpAffx.67495.1.S1_atDN496088hypothetical protein-2e+0At5g02020unknown proteinS.X.H.G.
0.5582.2PtpAffx.46447.1.S1_atCF228064histone deacetylase complex protein-2e-15At2g45640SAP18 (SIN3 ASSOCIATED POLYPEPTIDE P18)S.X.H.G.
0.5480.8Ptp.5377.1.S1_atBU832261hypothetical protein-1e-25At2g43810small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putativeS.X.H.G.
0.5178.9Ptp.7076.1.S1_atCK092656hypothetical protein-7e-66At4g14360dehydration-responsive protein-relatedS.X.H.G.
0.5178.9PtpAffx.7780.1.S1_atBU885713hypothetical protein-8e-28At5g06060tropinone reductase, putative / tropine dehydrogenase, putativeS.X.H.G.
0.5178.9Ptp.1279.1.S1_atCX660130hypothetical protein-3e-7At3g63460WD-40 repeat family proteinS.X.H.G.
0.5178.9PtpAffx.13778.2.S1_atBU811409hypothetical protein-1e-9At1g17720ATB BETAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.898.0GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
4.996.5GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
4.996.5GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
4.495.9GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
4.195.5GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
4.195.5GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
3.594.3GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
3.594.3GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
3.293.5GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
3.293.5GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9001394PtpAffx.38755.2.S1_s_atCV252052hypothetical protein-2e-56At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.680876Ptp.625.3.S1_atCV277321hypothetical protein-1e-25At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.670726PtpAffx.38755.1.A1_atCV260007hypothetical protein-7e-21At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.196e-29129PtpAffx.181.1.A1_atDN489690--7e+0At5g67560ATARLA1D (ADP-ribosylation factor-like A1D)C.G.S.X.
0.359e-25115PtpAffx.4827.1.A1_atCV273066--5e+0At3g23570dienelactone hydrolase family proteinC.G.S.X.
0.149e-25115Ptp.4752.1.S1_atCV275199hypothetical protein-5e-60At5g37680ATARLA1A (ADP-ribosylation factor-like A1A)C.G.S.X.
0.151e-861PtpAffx.6862.1.S1_atDN496244hypothetical protein-7e-24At5g37680ATARLA1A (ADP-ribosylation factor-like A1A)C.G.S.X.
0.027e-136PtpAffx.86981.1.A1_atBP930056--4e-14At4g38170FRS9 (FAR1-related sequence 9)C.G.S.X.
0.027e-136PtpAffx.7460.1.A1_atAJ780350--3e-23At4g20070ATAAH (Arabidopsis thaliana Allantoate Amidohydrolase)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.554e-60232Arabidopsis thalianaAt3g49870824149ATARLA1C (ADP-ribosylation factor-like A1C)A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.---C.G.S.X.
0.412e-47190Glycine maxGmaAffx.92317.1.S1_atCF808042--2e-54At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.293e-44178Hordeum vulgareContig9224_atContig9224--1e-38At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.293e-53210Oryza sativaOs03g0200800AK112007.1--5e-35At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.284e-48192Triticum aestivumTa.8631.1.S1_atCA690636--8e-28At5g67560ATARLA1D (ADP-ribosylation factor-like A1D)C.G.S.X.
0.468e-130462Vitis vinifera1607646_atCB977484hypothetical protein LOC100244584-7e-59At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.222e-1789Zea maysZm.14791.1.A1_atCF628382ADP-ribosylation factor-like protein 8B-7e-9At5g67560ATARLA1D (ADP-ribosylation factor-like A1D)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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