Gene omics information

Query gene ID Ptp.62.1.A1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4067.0Ptp.62.1.A1_s_atCK096214hypothetical protein-4e-1At3g55646unknown proteinS.X.H.G.
0.5784.2PtpAffx.25041.1.S1_atCV236081hypothetical protein-2e+0At4g29270acid phosphatase class B family proteinS.X.H.G.
0.5582.2Ptp.6631.1.S1_s_atCV243026thioredoxin h-5e-7At3g08710ATH9 (thioredoxin H-type 9)S.X.H.G.
0.4268.6PtpAffx.70542.1.S1_s_atCV275143hypothetical protein-2e-31At3g55920peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putativeS.X.H.G.
0.4067.0PtpAffx.222263.1.S1_atpmrna39563hypothetical protein-3e-1At1g03760prefoldin subunit family proteinS.X.H.G.
0.4067.0Ptp.4414.2.S1_s_atBU830367hypothetical protein-8e-36At1g61150-S.X.H.G.
0.2747.1Ptp.4924.1.S1_s_atCV229225--9e-96At5g52580RAB GTPase activatorS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.597.8GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
4.596.1GSM244430non infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.295.6GSM244435Mlp infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.995.1GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.393.7GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue series
3.393.7GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.293.5GSM244431non infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.193.2GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.193.2GSM244433Mlp infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.892.1GSM244439Mixed infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.192e-81303PtpAffx.200339.1.S1_s_atpmrna673hypothetical protein-8e-128At4g24100protein kinase family proteinC.G.S.X.
0.022e-138PtpAffx.34384.1.S1_s_atBU8239424-coumarate-coa ligase-4e-1At5g22460esterase/lipase/thioesterase family proteinC.G.S.X.
0.012e-138PtpAffx.222245.1.S1_atpmrna395324-coumarate-coa ligase-1e-9At1g204804-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinC.G.S.X.
0.022e-138PtpAffx.201021.1.S1_atpmrna2000--5e-1At2g16340unknown proteinC.G.S.X.
0.022e-138Ptp.4592.1.S1_s_atCV275994nucleosome/chromatin assembly factor group-4e-8At1g74560NRP1 (NAP1-RELATED PROTEIN 1)C.G.S.X.
0.022e-138Ptp.4592.1.S1_atCV275994nucleosome/chromatin assembly factor group-4e-8At1g74560NRP1 (NAP1-RELATED PROTEIN 1)C.G.S.X.
0.036e-136PtpAffx.120945.1.A1_atCV259350hypothetical protein-1e+0At5g23035-C.G.S.X.
0.012e+034PtpAffx.8745.1.S1_atCV229316hypothetical protein-4e+0At3g51642unknown proteinC.G.S.X.
0.012e+034PtpAffx.8745.1.S1_a_atCV229316hypothetical protein-4e+0At3g51642unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e-136Arabidopsis thalianaAt3g556463769719unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PM---C.G.S.X.
0.106e-446Glycine maxGma.578.2.S1_a_atBM177931--6e-10At4g10730ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseC.G.S.X.
0.032e-136Hordeum vulgareContig10837_atContig10837--2e-3At1g55300TAF7 (TBP-ASSOCIATED FACTOR 7)C.G.S.X.
0.033e+034Oryza sativaOs01g0547100NM_193354.1--1e-1At5g17340unknown proteinC.G.S.X.
0.042e+034Triticum aestivumTaAffx.8137.1.S1_atCA634460--3e+0At5g26630MADS-box protein (AGL35)C.G.S.X.
0.102e-1581Vitis vinifera1611250_atCB922487hypothetical protein LOC100249628-9e-4At4g24100protein kinase family proteinC.G.S.X.
0.037e-134Zea maysZm.2969.1.A1_atAW119986plant integral membrane protein TIGR01569 containing protein-1e-2At5g15290integral membrane family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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