Gene omics information

Query gene ID Ptp.5961.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7493.8Ptp.5961.1.S1_atCV280435hypothetical protein-6e-63At3g23660transport protein, putativeS.X.H.G.
0.5582.2PtpAffx.3505.2.S1_a_atCV233753hypothetical protein-4e-27At3g52190PHF1 (PHOSPHATE TRANSPORTER TRAFFIC FACILITATOR1)S.X.H.G.
0.5380.5PtpAffx.7182.2.S1_atCV261407--6e+0At2g30930unknown proteinS.X.H.G.
0.5279.4PtpAffx.207111.1.S1_x_atpmrna14095hypothetical protein-2e-34At5g65000nucleotide-sugar transporter family proteinS.X.H.G.
0.5178.9PtpAffx.7210.2.A1_atBP930061hypothetical protein-1e-9At2g46260BTB/POZ domain-containing proteinS.X.H.G.
0.5078.6PtpAffx.113579.1.S1_s_atCA930280hypothetical protein-4e-31At1g28490SYP61 (SYNTAXIN OF PLANTS 61)S.X.H.G.
0.4774.6PtpAffx.13438.1.S1_s_atAI167052hypothetical protein-2e-96At3g28715H+-transporting two-sector ATPase, putativeS.X.H.G.
0.4471.9PtpAffx.100134.1.A1_s_atCV230238--1e+1At1g01250AP2 domain-containing transcription factor, putativeS.X.H.G.
0.4067.0PtpAffx.25116.1.A1_atCV228813hypothetical protein-2e-8At3g54130josephin family proteinS.X.H.G.
0.4067.0PtpAffx.43623.2.A1_a_atCV227115hypothetical protein-7e-5At3g03610phagocytosis and cell motility protein ELMO1-relatedS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.797.9GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
6.197.6GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
6.097.5GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
5.897.4GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
5.497.0GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
3.594.3GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.293.5GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
2.992.5GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
2.791.8GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue series
2.590.9GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9902460Ptp.5961.1.S1_a_atCV280435hypothetical protein-6e-63At3g23660transport protein, putativeC.G.S.X.
0.5301265PtpAffx.215079.1.S1_atpmrna29044hypothetical protein-4e-78At3g23660transport protein, putativeC.G.S.X.
0.5301265PtpAffx.215079.1.S1_x_atpmrna29044hypothetical protein-4e-78At3g23660transport protein, putativeC.G.S.X.
0.293e-139496Ptp.5961.2.S1_atCV227075--6e+0At4g20290unknown proteinC.G.S.X.
0.645e-95349PtpAffx.71559.1.S1_s_atCK089679hypothetical protein-2e-16At3g23660transport protein, putativeC.G.S.X.
0.199e-38159Ptp.1214.1.A1_atCK090315--6e+0At2g21195unknown proteinC.G.S.X.
0.054e-344PtpAffx.9338.2.S1_atDN493456hypothetical protein-8e+0At5g37900seven in absentia (SINA) family proteinC.G.S.X.
0.054e-344PtpAffx.9338.1.S1_atCV277072hypothetical protein-9e-25At2g21630transport protein, putativeC.G.S.X.
0.011e-242PtpAffx.216904.1.S1_s_atpmrna31967hypothetical protein-2e-116At5g38880unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.336e-63242Arabidopsis thalianaAt3g23660821946transport protein, putativeF:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOP---C.G.S.X.
0.412e-54214Glycine maxGma.17594.3.S1_atCA785007--2e-12At3g23660transport protein, putativeC.G.S.X.
0.221e-31137Hordeum vulgareContig4761_atContig4761--2e-8At1g05520transport protein, putativeC.G.S.X.
0.242e-30135Oryza sativaOs11g0433500AK067849.1-Protein transport protein Sec23A (SEC23-relatedprotein A)1e-9At4g14160transport protein, putativeC.G.S.X.
0.205e-1479Triticum aestivumTa.26662.1.A1_a_atCD491499--3e-17At4g14160transport protein, putativeC.G.S.X.
0.101e-27123Vitis vinifera1615265_atCF514099hypothetical protein LOC100262252-2e-5At4g14160transport protein, putativeC.G.S.X.
0.196e-1891Zea maysZm.813.2.A1_atAY103619.1--5e-15At4g14160transport protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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