Gene omics information

Query gene ID Ptp.5748.1.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2Ptp.5748.1.S1_s_atCX657082hypothetical protein-3e-13At1g62510protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinS.X.H.G.
0.7393.6PtpAffx.249.2.S1_atD83226.1hypothetical protein-5e-16At1g62510protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinS.X.H.G.
0.6791.1PtpAffx.202166.1.S1_atpmrna4333hypothetical protein-2e-12At2g45430DNA-binding protein-relatedS.X.H.G.
0.6791.1PtpAffx.618.2.S1_a_atCV246676--5e-3At5g02380MT2B (METALLOTHIONEIN 2B)S.X.H.G.
0.5078.6PtpAffx.11593.1.S1_atCV259787hypothetical protein-1e-27At4g12080DNA-binding family proteinS.X.H.G.
0.3357.5PtpAffx.618.2.S1_x_atCV246676--5e-3At5g02380MT2B (METALLOTHIONEIN 2B)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.197.6GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
5.897.4GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
5.597.1GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
5.497.0GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
5.396.9GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
4.596.1GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
4.295.6GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
4.195.5GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
4.095.3GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
4.095.3GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.711e-139496PtpAffx.249.2.S1_atD83226.1hypothetical protein-5e-16At1g62510protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.421e-99363PtpAffx.249.118.S1_s_atCV275916hypothetical protein-2e-2At4g12510protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.417e-83307Ptp.2477.1.S1_s_atCV226314hypothetical protein-2e-4At1g62510protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.125e-1375PtpAffx.249.356.S1_atCV271423--4e-1At2g27160unknown proteinC.G.S.X.
0.147e-961PtpAffx.17000.1.S1_atCV273185--6e-3At1g12100lipid bindingC.G.S.X.
0.073e-550PtpAffx.14248.1.S1_atCV276072--9e-2At4g12530protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.024e-136PtpAffx.224567.1.S1_s_atpmrna43218hypothetical protein-5e-42At1g50310STP9 (SUGAR TRANSPORTER 9)C.G.S.X.
0.024e-136PtpAffx.224567.1.S1_atpmrna43218hypothetical protein-5e-42At1g50310STP9 (SUGAR TRANSPORTER 9)C.G.S.X.
0.012e+034PtpAffx.225304.1.S1_atpmrna44558hypothetical protein-2e-49At1g72440EDA25 (embryo sac development arrest 25)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.163e-1375Arabidopsis thalianaAt1g62510842548protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;OBPMVFA---C.G.S.X.
0.114e-446Glycine maxGmaAffx.80464.1.S1_atCA850542--4e-5At4g12490protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.032e+032Hordeum vulgareHVSMEl0009I21r2_atHVSMEl0009I21r2--1e+1At4g18230-C.G.S.X.
0.036e-136Oryza sativaOs10g04049009638.m02261-Homeobox-leucine zipper protein HAT5 (HD-ZIPprotein 5) (HD-ZIP protein ATHB-1)8e-3At5g15150ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)C.G.S.X.
0.061e+034Triticum aestivumTa.13950.3.S1_x_atCA638600--4e+0At1g12090ELP (EXTENSIN-LIKE PROTEIN)C.G.S.X.
0.211e-652Vitis vinifera1607766_atCF605363hypothetical protein LOC100252384-2e-5At1g12100lipid bindingC.G.S.X.
0.032e+032Zea maysZm.2541.1.A1_atCF629797cortical cell-delineating protein-2e+0At1g12090ELP (EXTENSIN-LIKE PROTEIN)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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