Gene omics information

Query gene ID Ptp.5663.1.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2Ptp.5663.1.S1_s_atCN549279hypothetical protein-2e-3At4g26400zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.5078.6PtpAffx.2427.1.S1_atCV274393hypothetical protein-2e-19At4g22680MYB85 (myb domain protein 85)S.X.H.G.
0.5078.6PtpAffx.26013.1.S1_atCV228387hypothetical protein-1e-11At2g46890oxidoreductase, acting on the CH-CH group of donorsS.X.H.G.
0.4369.7PtpAffx.1193.1.S1_atCV227263coniferylaldehyde 5- hydroxylase-6e-5At4g36220FAH1 (FERULIC ACID 5-HYDROXYLASE 1)S.X.H.G.
0.3357.5PtpAffx.8047.1.A1_atCV265327hypothetical protein-3e-2At2g36610ATHB22 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 22)S.X.H.G.
0.2950.5Ptp.6384.1.S1_a_atCV265840hypothetical protein-1e-19At1g46480WOX4 (WUSCHEL RELATED HOMEOBOX 4)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.799.7GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
17.599.6GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
13.699.4GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
8.498.6GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
7.098.0GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
2.992.5GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
2.791.8GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
2.490.4GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
2.289.3GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
2.088.0GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9601471Ptp.5663.1.S1_atCN549279hypothetical protein-2e-3At4g26400zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.401e-153543PtpAffx.14081.1.S1_atCV231498hypothetical protein-7e-9At3g46620zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.034e-240PtpAffx.54013.1.S1_atCF233803hypothetical protein-3e-8At1g55530zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.034e-240Ptp.4630.1.S1_atAI164519hypothetical protein-3e-17At1g55530zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.022e-138PtpAffx.38474.1.A1_atCV242899hypothetical protein-2e-3At3g50110ATPEN3 (ARABIDOPSIS THALIANA PTEN 3)C.G.S.X.
0.023e+034PtpAffx.50534.1.A1_s_atCV241892hypothetical protein-2e-52At2g38770EMB2765 (EMBRYO DEFECTIVE 2765)C.G.S.X.
0.013e+034PtpAffx.3573.1.S1_atDN485209--1e-5At3g50890AtHB28 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 28)C.G.S.X.
0.013e+034PtpAffx.219693.1.S1_atpmrna35674hypothetical protein-3e-32At1g77550protein binding / tubulin-tyrosine ligaseC.G.S.X.
0.023e+034PtpAffx.214384.1.S1_atpmrna27990hypothetical protein-3e-2At5g57450XRCC3C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-344Arabidopsis thalianaAt4g26400828746zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:response to chitin;C:endomembrane system;PMOFVB---C.G.S.X.
0.021e+132Glycine maxGmaAffx.56647.1.S1_atCA936003--2e-1At4g40100ABA-responsive protein-relatedC.G.S.X.
0.029e-134Hordeum vulgareContig18152_atContig18152--4e+0At3g53200AtMYB27 (myb domain protein 27)C.G.S.X.
0.031e+132Oryza sativaOsAffx.28314.1.A1_at---0C.G.S.X.
0.032e+034Triticum aestivumTaAffx.64082.1.S1_atBJ316151--4e+0At4g32130carbohydrate bindingC.G.S.X.
0.035e-134Vitis vinifera1622062_atCB340908--3e+0At1g64355unknown proteinC.G.S.X.
0.023e+032Zea maysZmAffx.475.1.A1_atAI677510--2e-1At1g74210glycerophosphoryl diester phosphodiesterase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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