Gene omics information

Query gene ID Ptp.5593.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.3559.7Ptp.5593.1.S1_atDN495608hypothetical protein-7e-15At4g26240unknown proteinS.X.H.G.
0.8096.0Ptp.7787.1.S1_s_atDN499212--4e+0At2g05642-S.X.H.G.
0.6086.0PtpAffx.135882.1.A1_atCV281275hypothetical protein-1e-7At1g78420protein binding / zinc ion bindingS.X.H.G.
0.4673.7Ptp.2558.1.S1_atCK096344hypothetical protein-0At1g78900VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A)S.X.H.G.
0.4471.9PtpAffx.12253.1.A1_atCV225881hypothetical protein-3e+0At4g32960unknown proteinS.X.H.G.
0.4369.7PtpAffx.25116.1.A1_atCV228813hypothetical protein-2e-8At3g54130josephin family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.195.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
3.794.7GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.193.2GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
3.092.9GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
1.987.2GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
1.886.4GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
1.886.4GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
1.886.4GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
1.785.5GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue series
1.684.5GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.025e-136PtpAffx.69786.1.S1_atCV243501hypothetical protein-9e-24At5g05170CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1)C.G.S.X.
0.015e-136PtpAffx.213331.1.S1_atpmrna26076hypothetical protein-1e-112At5g05170CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1)C.G.S.X.
0.025e-136Ptp.3250.1.S1_s_atBU815407hypothetical protein-5e-35At5g05170CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1)C.G.S.X.
0.012e+034PtpAffx.225226.1.S1_s_atpmrna44417hypothetical protein-5e-6At4g21370S-locus protein kinase, putativeC.G.S.X.
0.032e+034PtpAffx.220709.1.S1_atpmrna37125hypothetical protein-6e-1At3g03830auxin-responsive protein, putativeC.G.S.X.
0.022e+034PtpAffx.213844.1.S1_atpmrna27010hypothetical protein-3e-6At2g32770purple acid phosphatase (PAP13)C.G.S.X.
0.012e+034PtpAffx.210075.1.S1_atpmrna19848hypothetical protein-1e-2At5g27060AtRLP53 (Receptor Like Protein 53)C.G.S.X.
0.012e+034PtpAffx.207033.1.S1_atpmrna13939hypothetical protein-4e-14At3g18730TSK (TONSOKU)C.G.S.X.
0.022e+034PtpAffx.202190.1.S1_atpmrna4376hypothetical protein-4e-32At3g61080fructosamine kinase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.157e-1581Arabidopsis thalianaAt4g26240828730unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PF---C.G.S.X.
0.042e+034Glycine maxGma.11937.1.A1_atBF070961--2e-4At3g02110scpl25 (serine carboxypeptidase-like 25)C.G.S.X.
0.033e+032Hordeum vulgareContig21616_s_atContig21616--8e-1At4g18480CHLI1C.G.S.X.
0.034e-240Oryza sativaOs01g0559300AK064666.1-Conserved hypothetical protein1e-4At4g26240unknown proteinC.G.S.X.
0.116e-652Triticum aestivumTaAffx.29030.1.S1_atBJ286616--3e-2At4g26240unknown proteinC.G.S.X.
0.042e+032Vitis vinifera1617472_atCB970516hypothetical protein LOC100262721-1e+0At2g10930unknown proteinC.G.S.X.
0.072e-756Zea maysZm.1437.1.A1_atCF635289hypothetical protein LOC100193312-2e+0At4g01220-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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