CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ptp.460.1.A1_at

Gene name hypothetical protein

Organism Populus trichocarpa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 91.1 Ptp.460.1.A1_at CK087646 hypothetical protein - 1e-34 At5g27490 integral membrane Yip1 family protein S.X. H.G.
0.77 94.9 PtpAffx.136012.1.A1_at CV269634 hypothetical protein - 3e-1 At3g56080 dehydration-responsive protein-related S.X. H.G.
0.67 91.1 Ptp.2158.1.S1_at CV227156 hypothetical protein - 7e-3 At4g29350 PFN2 (PROFILIN 2) S.X. H.G.
0.50 78.6 PtpAffx.29775.2.S1_a_at CV267475 hypothetical protein - 3e+0 At3g23350 - S.X. H.G.
0.44 71.9 Ptp.1481.1.S1_at CV277723 hypothetical protein - 4e-5 At3g15770 unknown protein S.X. H.G.
0.18 30.8 Ptp.1758.1.A1_at CV229748 hypothetical protein - 5e-50 At1g60780 HAP13 (HAPLESS 13) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.2 98.5 GSM327656 Populus balsamifera_Female_Catkin_midday_1 GSE13990 Populus balsamifera developmental tissue series
5.0 96.6 GSM327413 Populus balsamifera_1006_differentiating_xylem_midday_3 GSE13990 Populus balsamifera developmental tissue series
4.7 96.3 GSM327658 Populus balsamifera_Female_Catkin_midday_3 GSE13990 Populus balsamifera developmental tissue series
4.7 96.3 GSM327657 Populus balsamifera_Female_Catkin_midday_2 GSE13990 Populus balsamifera developmental tissue series
4.4 95.9 GSM327659 Populus balsamifera_Male_Catkin_midday_1 GSE13990 Populus balsamifera developmental tissue series
3.1 93.2 GSM327411 Populus balsamifera_1006_differentiating_xylem_midday_1 GSE13990 Populus balsamifera developmental tissue series
3.1 93.2 GSM327403 Populus balsamifera_20071015_Etiolated_seedling_6d_3 GSE13990 Populus balsamifera developmental tissue series
2.6 91.3 GSM327412 Populus balsamifera_1006_differentiating_xylem_midday_2 GSE13990 Populus balsamifera developmental tissue series
2.5 90.9 GSM327398 Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3 GSE13990 Populus balsamifera developmental tissue series
2.3 89.8 GSM327402 Populus balsamifera_20071015_Etiolated_seedling_6d_2 GSE13990 Populus balsamifera developmental tissue series
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.66 0 741 PtpAffx.675.5.S1_at CF227425 hypothetical protein - 4e-45 At5g27490 integral membrane Yip1 family protein C.G. S.X.
0.17 8e-37 155 Ptp.5789.1.S1_at AI162378 hypothetical protein - 2e-11 At5g27490 integral membrane Yip1 family protein C.G. S.X.
0.02 1e-1 38 PtpAffx.19609.1.A1_at CV260417 hypothetical protein - 2e-10 At1g67330 unknown protein C.G. S.X.
0.02 1e-1 38 PtpAffx.19609.1.A1_a_at CV260417 hypothetical protein - 2e-10 At1g67330 unknown protein C.G. S.X.
0.03 2e+0 34 PtpAffx.22177.1.A1_at CK094837 hypothetical protein - 1e+0 At1g23147 RALFL3 (RALF-LIKE 3) C.G. S.X.
0.02 2e+0 34 PtpAffx.204761.1.S1_at pmrna9374 hypothetical protein - 2e-10 At4g17000 unknown protein C.G. S.X.
0.01 2e+0 34 Ptp.5294.1.S1_at CV244493 hypothetical protein - 9e-88 At4g24860 AAA-type ATPase family protein C.G. S.X.
0.02 8e+0 32 PtpAffx.5465.1.A1_at CK319074 aquaporin, MIP family, PIP subfamily - 3e-67 At4g35100 PIP3 (PLASMA MEMBRANE INTRINSIC PROTEIN 3) C.G. S.X.
0.02 8e+0 32 PtpAffx.5465.1.A1_x_at CK319074 aquaporin, MIP family, PIP subfamily - 3e-67 At4g35100 PIP3 (PLASMA MEMBRANE INTRINSIC PROTEIN 3) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.36 1e-34 147 Arabidopsis thaliana At5g27490 832808 integral membrane Yip1 family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFP - - - C.G. S.X.
0.30 3e-24 113 Glycine max Gma.739.1.S1_at BG882670 - - 6e-15 At5g27490 integral membrane Yip1 family protein C.G. S.X.
0.06 7e-1 34 Hordeum vulgare Contig9005_at Contig9005 - - 1e-14 At3g05280 integral membrane Yip1 family protein C.G. S.X.
0.04 2e-1 38 Oryza sativa Os01g0610500 AK105469.1 - Conserved hypothetical protein 1e-14 At3g05280 integral membrane Yip1 family protein C.G. S.X.
0.09 2e+0 34 Triticum aestivum Ta.7590.2.S1_a_at CK215141 - - 9e-8 At5g27490 integral membrane Yip1 family protein C.G. S.X.
0.29 1e-22 105 Vitis vinifera 1619947_at BQ794365 hypothetical protein LOC100266603 - 5e-6 At3g05280 integral membrane Yip1 family protein C.G. S.X.
0.13 2e-4 46 Zea mays Zm.3919.1.S1_at BG840867 hypothetical protein LOC100194180 - 7e-16 At3g05280 integral membrane Yip1 family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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