Gene omics information

Query gene ID Ptp.4252.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5078.6Ptp.4252.1.S1_atDN499823hypothetical protein-1e-2At5g08290YLS8S.X.H.G.
0.6791.1Ptp.3038.1.A1_atCV237450acyl:coa ligase acetate-coa synthetase-like protein-6e-4At1g68270AMP-dependent synthetase and ligase family proteinS.X.H.G.
0.5078.6Ptp.6751.1.A1_s_atCK090811hypothetical protein-6e-4At2g29710UDP-glucoronosyl/UDP-glucosyl transferase family proteinS.X.H.G.
0.3661.6PtpAffx.249.361.A1_atBU830482hypothetical protein-5e-3At4g24220VEP1 (VEIN PATTERNING 1)S.X.H.G.
0.3559.7Ptp.2209.1.S1_atBU893674cytochrome P450 /// cytochrome P450-2e-1At5g66815unknown proteinS.X.H.G.
0.1830.8PtpAffx.205060.1.S1_atpmrna10021hypothetical protein-3e-63At3g53450unknown proteinS.X.H.G.
0.0914.6Ptp.4879.1.S1_atBU810630hypothetical protein-3e-1At5g11920AtcwINV6 (6-&1-fructan exohydrolase)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
36.0100.0GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
8.598.6GSM362884Clone1979_LPI2_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
8.198.5GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
5.196.8GSM328063Populus x canescens leaf control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
3.995.1GSM362885Clone1979_LPI2_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.393.7GSM372044Clone1979_LPI5_N+_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.892.1GSM328274Populus x canescens leaf hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
2.289.3GSM372045Clone1979_LPI5_N+_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.188.6GSM328070Populus x canescens leaf control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
2.088.0GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.176e-1477Ptp.53.1.S1_atCV243971hypothetical protein-2e-22At3g55440TPI (TRIOSEPHOSPHATE ISOMERASE)C.G.S.X.
0.048e-134PtpAffx.88663.1.A1_atCV257263--1e+0At5g28491unknown proteinC.G.S.X.
0.018e-134PtpAffx.212360.1.S1_atpmrna24227hypothetical protein-5e-102At1g22620ATSAC1 (suppressor of actin 1)C.G.S.X.
0.018e-134PtpAffx.203963.1.S1_atpmrna7818hypothetical protein-1e-102At5g16715EMB2247 (embryo defective 2247)C.G.S.X.
0.018e-134PtpAffx.202585.1.S1_s_atpmrna5178hypothetical protein-9e-107At5g16715EMB2247 (embryo defective 2247)C.G.S.X.
0.058e-134Ptp.1398.1.S1_atDN488079hypothetical protein-1e-75At3g55440TPI (TRIOSEPHOSPHATE ISOMERASE)C.G.S.X.
0.058e-134Ptp.1398.1.S1_s_atDN488079hypothetical protein-1e-75At3g55440TPI (TRIOSEPHOSPHATE ISOMERASE)C.G.S.X.
0.033e+032PtpAffx.75393.1.S1_atCV271832hypothetical protein-1e+0At5g22530unknown proteinC.G.S.X.
0.013e+032PtpAffx.224508.1.S1_atpmrna43107hypothetical protein-3e-38At4g15090FAR1 (FAR-RED IMPAIRED RESPONSE 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.061e-240Arabidopsis thalianaAt5g08290830725YLS8Encodes Dim1 homolog.---C.G.S.X.
0.072e-136Glycine maxGmaAffx.66131.1.A1_atAI960551--2e+0At2g28090heavy-metal-associated domain-containing proteinC.G.S.X.
0.063e-134Hordeum vulgarerbags16n19_s_atrbags16n19--5e-1At1g49590formin-binding protein-relatedC.G.S.X.
0.033e-136Oryza sativaOsAffx.9156.1.S1_at---0C.G.S.X.
0.062e+032Triticum aestivumTa.6850.2.S1_a_atCA662053--2e-17At5g52210ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1)C.G.S.X.
0.063e+030Vitis vinifera1615826_atBQ795976hypothetical protein LOC100258154-6e+0At3g06740zinc finger (GATA type) family proteinC.G.S.X.
0.041e+032Zea maysZm.3889.1.A1_atCK371158Triosephosphate isomerase, cytosolic-1e-24At3g55440TPI (TRIOSEPHOSPHATE ISOMERASE)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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