Gene omics information

Query gene ID Ptp.4187.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5784.2Ptp.4187.1.S1_atCA930797hypothetical protein-2e-9At1g0740017.8 kDa class I heat shock protein (HSP17.8-CI)S.X.H.G.
0.8497.1Ptp.5317.1.S1_s_atBU832693hypothetical protein-2e-15At5g47390myb family transcription factorS.X.H.G.
0.7995.3PtpAffx.161291.1.S1_atCX170912hypothetical protein-6e-25At5g56630PFK7 (PHOSPHOFRUCTOKINASE 7)S.X.H.G.
0.6991.5PtpAffx.205187.1.S1_s_atpmrna10271hypothetical protein-5e-32At5g65140trehalose-6-phosphate phosphatase, putativeS.X.H.G.
0.6588.6PtpAffx.217953.1.S1_atpmrna33427hypothetical protein-1e-13At1g49230zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.6388.1Ptp.4951.1.S1_s_atBU811643hypothetical protein-5e-11At1g51140basic helix-loop-helix (bHLH) family proteinS.X.H.G.
0.6187.0PtpAffx.205187.1.S1_atpmrna10271hypothetical protein-5e-32At5g65140trehalose-6-phosphate phosphatase, putativeS.X.H.G.
0.6187.0PtpAffx.160721.1.S1_s_atAJ769720hypothetical protein-2e-5At5g10100trehalose-6-phosphate phosphatase, putativeS.X.H.G.
0.6187.0PtpAffx.206345.1.S1_atpmrna12596hypothetical protein-7e-10At2g30970ASP1 (ASPARTATE AMINOTRANSFERASE 1)S.X.H.G.
0.5784.2PtpAffx.4862.1.S1_a_atBP936752hypothetical protein-3e-18At5g44730haloacid dehalogenase-like hydrolase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
25.799.9GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
13.999.4GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
11.199.1GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
5.997.4GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
5.897.4GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
4.796.3GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
2.892.1GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
2.088.0GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
1.381.0GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
1.076.2GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.8601223PtpAffx.59631.1.S1_s_atBI784472hypothetical protein-7e-6At1g5986017.6 kDa class I heat shock protein (HSP17.6A-CI)C.G.S.X.
0.555e-112404PtpAffx.14337.3.S1_atBU890078--6e-3At2g2950017.6 kDa class I small heat shock protein (HSP17.6B-CI)C.G.S.X.
0.551e-103377Ptp.4166.1.S1_atBU893124--9e-2At5g59720HSP18.2 (heat shock protein 18.2)C.G.S.X.
0.574e-97355PtpAffx.14337.1.S1_atCV227692--1e-3At5g59720HSP18.2 (heat shock protein 18.2)C.G.S.X.
0.422e-93343PtpAffx.14337.2.A1_atBU892673--3e-2At1g5986017.6 kDa class I heat shock protein (HSP17.6A-CI)C.G.S.X.
0.452e-89329PtpAffx.21139.1.S1_atBU889382hypothetical protein-2e-15At1g0740017.8 kDa class I heat shock protein (HSP17.8-CI)C.G.S.X.
0.435e-78291PtpAffx.27422.1.S1_atBU892225hypothetical protein-4e-4At1g0740017.8 kDa class I heat shock protein (HSP17.8-CI)C.G.S.X.
0.435e-78291PtpAffx.27422.1.S1_x_atBU892225hypothetical protein-4e-4At1g0740017.8 kDa class I heat shock protein (HSP17.8-CI)C.G.S.X.
0.471e-72274PtpAffx.78723.1.S1_atDN496556--3e-2At2g2950017.6 kDa class I small heat shock protein (HSP17.6B-CI)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.332e-963Arabidopsis thalianaAt1g0740083725217.8 kDa class I heat shock protein (HSP17.8-CI)F:unknown;P:response to oxidative stress, response to heat;C:unknown;BPOFAM---C.G.S.X.
0.401e-51204Glycine maxGmaAffx.93268.1.S1_atCF807875--2e-9At2g2950017.6 kDa class I small heat shock protein (HSP17.6B-CI)C.G.S.X.
0.205e-1167Hordeum vulgareContig2007_s_atContig2007--3e-5At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)C.G.S.X.
0.192e-1067Oryza sativaOs01g0136200AK121025.1-17.7 kDa heat shock protein1e-4At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)C.G.S.X.
0.226e-342Triticum aestivumTa.27661.1.S1_atAJ614980heat shock protein 16.9-5e-19At3g46230ATHSP17.4C.G.S.X.
0.322e-1581Vitis vinifera1621652_atCF518056hypothetical protein LOC100262206-6e-9At5g59720HSP18.2 (heat shock protein 18.2)C.G.S.X.
0.132e-136Zea maysZm.2361.1.A1_atBM381388hypothetical protein LOC100191552-3e-17At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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