Gene omics information

Query gene ID Ptp.3744.1.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5078.6Ptp.3744.1.S1_s_atBU892630hypothetical protein-1e-9At3g16720ATL2S.X.H.G.
0.8096.0PtpAffx.136381.2.S1_s_atCN518102hypothetical protein-1e-3At3g61460BRH1 (BRASSINOSTEROID-RESPONSIVE RING-H2)S.X.H.G.
0.6187.0Ptp.3747.1.S1_s_atDN488219AP2/ERF domain-containing transcription factor-2e-1At5g43410ethylene-responsive factor, putativeS.X.H.G.
0.5582.2PtpAffx.79516.1.S1_atAY780430.1--7e-16At3g16720ATL2S.X.H.G.
0.5380.5Ptp.6284.1.S1_atBU815355hypothetical protein-2e-13At5g58620zinc finger (CCCH-type) family proteinS.X.H.G.
0.4268.6Ptp.3082.1.S1_s_atCF232410hypothetical protein-6e-1At3g5954060S ribosomal protein L38 (RPL38B)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
17.899.7GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
6.797.9GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
5.096.6GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
3.995.1GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
3.794.7GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
3.494.0GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
3.293.5GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
2.992.5GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
2.992.5GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
2.691.3GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.458e-120430PtpAffx.79516.1.S1_atAY780430.1--7e-16At3g16720ATL2C.G.S.X.
0.071e-448PtpAffx.204793.1.S1_x_atpmrna9444hypothetical protein-2e-8At1g72310ATL3C.G.S.X.
0.023e-240PtpAffx.206554.1.S1_atpmrna13002hypothetical protein-8e-10At4g30400zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.073e-240PtpAffx.200908.1.S1_x_atpmrna1788hypothetical protein-1e-6At3g16720ATL2C.G.S.X.
0.021e-138PtpAffx.210647.1.S1_s_atpmrna20884hypothetical protein-1e-58At4g24890PAP24 (PURPLE ACID PHOSPHATASE 24)C.G.S.X.
0.024e-136PtpAffx.697.3.S1_atDN485285hypothetical protein-2e+0At5g46030unknown proteinC.G.S.X.
0.044e-136PtpAffx.39700.1.S1_atCF229096--3e+0At1g63970ISPFC.G.S.X.
0.024e-136PtpAffx.224521.1.S1_atpmrna43140hypothetical protein-2e-6At4g32710ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseC.G.S.X.
0.044e-136PtpAffx.221356.1.S1_atpmrna38208hypothetical protein-1e+0At2g20680glycosyl hydrolase family 5 protein / cellulase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.111e-963Arabidopsis thalianaAt3g16720820924ATL2RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations.---C.G.S.X.
0.115e-1685Glycine maxGmaAffx.53152.1.S1_atBE823592--6e-7At3g16720ATL2C.G.S.X.
0.043e-342Hordeum vulgareHA31F17r_atHA31F17r--4e-3At4g15975protein binding / zinc ion bindingC.G.S.X.
0.033e+034Oryza sativaOsAffx.17318.1.A1_at---0C.G.S.X.
0.045e-342Triticum aestivumTaAffx.107021.1.S1_atCA707574--3e-3At4g15975protein binding / zinc ion bindingC.G.S.X.
0.101e-446Vitis vinifera1622773_atCF605812hypothetical protein LOC100253381-2e-2At4g15975protein binding / zinc ion bindingC.G.S.X.
0.032e+032Zea maysZmAffx.722.1.A1_atAI739911--7e-19At5g0296040S ribosomal protein S23 (RPS23B)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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