Gene omics information

Query gene ID Ptp.3625.1.A1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6388.1Ptp.3625.1.A1_atCV267089hypothetical protein-2e-12At3g07560PEX13 (PEROXIN 13)S.X.H.G.
0.4268.6Ptp.2014.1.S1_s_atCV258759hypothetical protein-2e-50At4g29490aminopeptidase/ manganese ion bindingS.X.H.G.
0.4067.0PtpAffx.108603.1.A1_s_atCV279639hypothetical protein-8e-1At5g59420ORP3C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3C)S.X.H.G.
0.3863.7PtpAffx.108517.1.A1_atCV236445hypothetical protein-3e-14At5g35460unknown proteinS.X.H.G.
0.3458.3PtpAffx.203451.1.S1_atpmrna6871hypothetical protein-5e-9At1g04790zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.3357.5PtpAffx.30368.1.S1_atCV254627hypothetical protein-1e-1At1g76180ERD14 (EARLY RESPONSE TO DEHYDRATION 14)S.X.H.G.
0.3052.0PtpAffx.74520.1.S1_s_atCV275234hypothetical protein-7e-57At3g01090AKIN10 (Arabidopsis SNF1 kinase homolog 10)S.X.H.G.
0.2950.5PtpAffx.12741.1.A1_atCV234093--8e-2At4g08230glycine-rich proteinS.X.H.G.
0.2747.1PtpAffx.211018.1.S1_atpmrna21651hypothetical protein-2e-152At5g28850calcium-binding EF hand family proteinS.X.H.G.
0.2034.6PtpAffx.72180.1.S1_s_atAI162185hypothetical protein-4e-13At3g51040RTH (RTE1-HOMOLOG)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.293.5GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
3.092.9GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.791.8GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.590.9GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.289.3GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.088.0GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.088.0GSM244433Mlp infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
1.987.2GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
1.987.2GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.987.2GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.133e-1583PtpAffx.7154.1.S1_atCF233688hypothetical protein-1e-8At3g07560PEX13 (PEROXIN 13)C.G.S.X.
0.027e-136PtpAffx.3477.3.A1_s_atCV230833vacuolar H+-translocating inorganic pyrophosphatase-2e-18At1g16780vacuolar-type H+-translocating inorganic pyrophosphatase, putativeC.G.S.X.
0.027e-136PtpAffx.3477.1.A1_atBP933638vacuolar H+-translocating inorganic pyrophosphatase-1e-128At1g78920AVP2 (ARABIDOPSIS VACUOLAR H+-PYROPHOSPHATASE 2)C.G.S.X.
0.027e-136PtpAffx.3477.3.A1_atCV230833--2e-18At1g16780vacuolar-type H+-translocating inorganic pyrophosphatase, putativeC.G.S.X.
0.017e-136PtpAffx.214540.1.S1_atpmrna28255vacuolar H+-translocating inorganic pyrophosphatase-0At1g15690AVP1C.G.S.X.
0.027e-136Ptp.6524.1.S1_s_atBU863669vacuolar H+-translocating inorganic pyrophosphatase-0At1g15690AVP1C.G.S.X.
0.017e-136Ptp.3620.1.S1_s_atCX179885vacuolar H+-translocating inorganic pyrophosphatase-0At1g15690AVP1C.G.S.X.
0.027e-136Ptp.2699.1.A1_s_atCV234550vacuolar H+-translocating inorganic pyrophosphatase-1e-100At1g15690AVP1C.G.S.X.
0.027e-136Ptp.2217.1.S1_atBP933874vacuolar H+-translocating inorganic pyrophosphatase-6e-28At1g16780vacuolar-type H+-translocating inorganic pyrophosphatase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.092e-1273Arabidopsis thalianaAt3g07560819945PEX13 (PEROXIN 13)Encodes peroxin 13 (PEX13) involved in protein transport into peroxisomes.---C.G.S.X.
0.201e-861Glycine maxGma.11224.2.S1_s_atBM091821--2e-3At3g07560PEX13 (PEROXIN 13)C.G.S.X.
0.031e+034Hordeum vulgareHK05P12r_x_atHK05P12r--2e+0At2g06925PLA2-ALPHAC.G.S.X.
0.021e-346Oryza sativaOs03g0786000AK061286.1-Conserved hypothetical protein3e+0At3g07560PEX13 (PEROXIN 13)C.G.S.X.
0.042e-344Triticum aestivumTaAffx.110958.1.S1_atCA650894--4e+0At5g18000transcriptional factor B3 family proteinC.G.S.X.
0.208e-22103Vitis vinifera1612141_atCF515249hypothetical protein LOC100251659-1e-16At3g07560PEX13 (PEROXIN 13)C.G.S.X.
0.049e-444Zea maysZm.10077.1.A1_atCA399756glycine-rich protein-7e-1At3g07560PEX13 (PEROXIN 13)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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