Gene omics information

Query gene ID Ptp.3474.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8397.0Ptp.3474.1.S1_atDN492800hypothetical protein-2e-15At1g61130SCPL32 (SERINE CARBOXYPEPTIDASE-LIKE 32)S.X.H.G.
0.6991.5Ptp.164.1.S1_atCV251881hypothetical protein-3e-2At1g14440AtHB31 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 31)S.X.H.G.
0.6388.1PtpAffx.224454.1.S1_atpmrna43008hypothetical protein-2e-7At1g08440-S.X.H.G.
0.6287.2PtpAffx.205555.1.S1_atpmrna10986hypothetical protein-2e-11At5g20240PI (PISTILLATA)S.X.H.G.
0.6187.0PtpAffx.163046.1.S1_atBU876539beta-ketoacyl-coa synthase family protein-1e-7At1g71160KCS7 (3-KETOACYL-COA SYNTHASE 7)S.X.H.G.
0.5582.2PtpAffx.215530.1.S1_atpmrna29783hypothetical protein-5e-9At5g46090unknown proteinS.X.H.G.
0.5582.2PtpAffx.207156.1.S1_atpmrna14196cytochrome P450-1e-5At2g23180CYP96A1S.X.H.G.
0.5380.5PtpAffx.43906.1.A1_atCV253972hypothetical protein-4e-7At2g28200nucleic acid binding / transcription factor/ zinc ion bindingS.X.H.G.
0.5279.4PtpAffx.208522.1.S1_atpmrna16907hypothetical protein-2e-14At3g06210bindingS.X.H.G.
0.5279.4PtpAffx.208303.1.S1_atpmrna16516hypothetical protein-1e-1At1g55330AGP21S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
29.599.9GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
26.199.9GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
13.899.4GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
7.098.0GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
2.992.5GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.389.8GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.188.6GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
1.583.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
1.076.2GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
0.769.4GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.402e-74280PtpAffx.18886.1.A1_atCV230225hypothetical protein-5e-20At4g15100scpl30 (serine carboxypeptidase-like 30)C.G.S.X.
0.038e-652PtpAffx.209392.1.S1_atpmrna18602hypothetical protein-2e-10At3g07990SCPL27 (serine carboxypeptidase-like 27)C.G.S.X.
0.032e-344PtpAffx.207644.1.S1_atpmrna15164hypothetical protein-7e-4At2g35770scpl28 (serine carboxypeptidase-like 28)C.G.S.X.
0.038e-342PtpAffx.206051.1.S1_atpmrna11993hypothetical protein-2e-4At1g28110SCPL45 (SERINE CARBOXYPEPTIDASE-LIKE 45 PRECURSOR)C.G.S.X.
0.048e-342PtpAffx.204123.1.S1_atpmrna8134hypothetical protein-1e-23At3g02110scpl25 (serine carboxypeptidase-like 25)C.G.S.X.
0.025e-136PtpAffx.62432.1.S1_atCV266495--5e-8At4g24430lyaseC.G.S.X.
0.025e-136PtpAffx.208514.1.S1_atpmrna16896hypothetical protein-2e+0At4g27657unknown proteinC.G.S.X.
0.025e-136PtpAffx.207404.1.S1_atpmrna14695hypothetical protein-3e-8At5g42490kinesin motor family proteinC.G.S.X.
0.015e-136PtpAffx.204438.1.S1_atpmrna8715hypothetical protein-1e-9At5g20950glycosyl hydrolase family 3 proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.232e-1583Arabidopsis thalianaAt1g61130842406SCPL32 (SERINE CARBOXYPEPTIDASE-LIKE 32)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB---C.G.S.X.
0.362e-37157Glycine maxGma.869.1.S1_atBE822531--4e-5At4g15100scpl30 (serine carboxypeptidase-like 30)C.G.S.X.
0.023e+032Hordeum vulgareContig6501_s_atContig6501--2e+1At5g18540unknown proteinC.G.S.X.
0.033e+034Oryza sativaOs.26518.1.S1_at---0C.G.S.X.
0.042e+034Triticum aestivumTaAffx.113970.1.S1_atCA600525--4e-1At5g48180NSP5 (NITRILE SPECIFIER PROTEIN 5)C.G.S.X.
0.063e-548Vitis vinifera1620442_atCB971589hypothetical protein LOC100266848-1e-15At3g02110scpl25 (serine carboxypeptidase-like 25)C.G.S.X.
0.036e-134Zea maysZm.3034.1.A1_atAW134469ZCN15 protein-2e-2At2g27550ATC (ARABIDOPSIS THALIANA CENTRORADIALIS)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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