Gene omics information

Query gene ID Ptp.2560.3.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2Ptp.2560.3.S1_s_atCK092469hypothetical protein-2e-27At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)S.X.H.G.
0.9199.2Ptp.2560.1.S1_s_atCV270621hypothetical protein-1e-65At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)S.X.H.G.
0.6791.1Ptp.7072.1.S1_s_atCA926150hypothetical protein-1e-62At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)S.X.H.G.
0.5582.2Ptp.5776.1.S1_s_atCV271742hypothetical protein-4e-1At4g04470PMP22S.X.H.G.
0.1016.3PtpAffx.65560.1.S1_atCV240577--9e-13At5g19980integral membrane family proteinS.X.H.G.
0.0914.6Ptp.5645.3.A1_a_atCK087236hypothetical protein-4e-7At3g49010ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC CONSERVED 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.497.0GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
3.995.1GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
3.995.1GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
3.293.5GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
3.293.5GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
3.092.9GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
2.992.5GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
2.992.5GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
2.892.1GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
2.892.1GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.580924Ptp.2560.2.S1_a_atBU835696hypothetical protein-3e-67At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)C.G.S.X.
0.332e-108393Ptp.2560.1.S1_s_atCV270621hypothetical protein-1e-65At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)C.G.S.X.
0.053e-859PtpAffx.5890.1.S1_atCV230515hypothetical protein-4e-15At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)C.G.S.X.
0.031e-138Ptp.2354.1.S1_s_atCK087361hypothetical protein-6e-7At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)C.G.S.X.
0.024e-136PtpAffx.203694.1.S1_atpmrna7317hypothetical protein-2e-7At1g61820BGLU46 (BETA GLUCOSIDASE 46)C.G.S.X.
0.032e+034PtpAffx.9921.3.A1_a_atCV229664hypothetical protein-8e-8At1g80270DNA-binding protein, putativeC.G.S.X.
0.032e+034PtpAffx.9921.3.A1_atCV229664hypothetical protein-8e-8At1g80270DNA-binding protein, putativeC.G.S.X.
0.032e+034PtpAffx.81993.1.A1_atCV264929--9e-1At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)C.G.S.X.
0.012e+034PtpAffx.205676.1.S1_atpmrna11208hypothetical protein-2e-34At2g30800HVT1 (HELICASE IN VASCULAR TISSUE AND TAPETUM)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.192e-27123Arabidopsis thalianaAt5g17770831645ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor.---C.G.S.X.
0.202e-37157Glycine maxGmaAffx.91300.1.S1_s_atCF805768--9e-67At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)C.G.S.X.
0.052e-756Hordeum vulgareContig7709_atContig7709--9e-25At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)C.G.S.X.
0.093e-963Oryza sativaOs05g0488900AK071883.1-Cytochrome b5 reductase5e-20At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)C.G.S.X.
0.079e-857Triticum aestivumTa.27662.1.A1_atAY290735.1--3e-11At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)C.G.S.X.
0.142e-1581Vitis vinifera1611672_atCF404860hypothetical protein LOC100247986-2e-24At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)C.G.S.X.
0.078e-340Zea maysZm.428.1.S1_atAF077372.1hypothetical protein LOC100191335-8e-16At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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