Gene omics information

Query gene ID PsAffx.psZS010xK06f_s_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9699.6PsAffx.psZS010xK06f_s_atPsAffx.psZS010xK06f--3e-1At1g19300PARVUS (PARVUS)S.X.H.G.
0.5172.3PsAffx.C17000057_atPsAffx.C17000057--5e+0At5g07330unknown proteinS.X.H.G.
0.4665.5PsAffx.C40000003_atPsAffx.C40000003--2e+0At5g41390-S.X.H.G.
0.4158.1PsAffx.psHA010iE04r_s_atPsAffx.psHA010iE04r--4e+0At3g42560unknown proteinS.X.H.G.
0.3954.5PsAffx.psZO002iD02r_atPsAffx.psZO002iD02r--4e+0At4g13500unknown proteinS.X.H.G.
0.3650.8PsAffx.psMA013xH08f_atPsAffx.psMA013xH08f--4e+0At5g54095unknown proteinS.X.H.G.
0.3040.4PsAffx.C8000052_atPsAffx.C8000052--4e-1At2g15280reticulon family protein (RTNLB10)S.X.H.G.
0.2939.0PsAffx.C96000007_s_atPsAffx.C96000007--3e+0At5g58580ATL63 (ARABIDOPSIS TÓS.X.H.G.
0.2735.7PsAffx.C2000206_atPsAffx.C2000206--1e+0At5g25530DNAJ heat shock protein, putativeS.X.H.G.
0.2329.9PsAffx.C134000032_atPsAffx.C134000032--3e-1At2g39880MYB25 (myb domain protein 25)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
251.3100.0GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
78.7100.0GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
62.199.9GSM29244849_C110.1G.V7G1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
32.399.9GSM29308281_C019.1N.R9N1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
24.499.8GSM29283818_C211.1L.SLL3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
21.999.8GSM201096Laser capture microdissected (LCM) axis epidermis at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
18.699.7GSM17167528_W.I.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
18.199.7GSM1717208_Y.E.I.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
15.899.6GSM24481318_VP9.I5U4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
15.299.6GSM24480717_CON.M2W3.CEL, Experimental replicate 3GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e-344PsAffx.C156000019_atPsAffx.C156000019--7e-3At1g78410VQ motif-containing proteinC.G.S.X.
0.013e-240PsAffx.C72000060_atPsAffx.C72000060--3e-1At1g64650-C.G.S.X.
0.011e-138PsAffx.C69000057_atPsAffx.C69000057--1e-6At3g11020DREB2B (DRE/CRT-BINDING PROTEIN 2B)C.G.S.X.
0.011e-138PsAffx.C6000039_atPsAffx.C6000039--4e+0At3g19570unknown proteinC.G.S.X.
0.031e-138PsAffx.C59000076_atPsAffx.C59000076--2e-2At1g51355unknown proteinC.G.S.X.
0.031e-138PsAffx.C44000041_atPsAffx.C44000041--6e+0At4g24026unknown proteinC.G.S.X.
0.021e-138PsAffx.C1112000001_s_atPsAffx.C1112000001--8e-1At5g17870PSRP6 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 6)C.G.S.X.
0.021e-138PsAffx.C113000028_atPsAffx.C113000028--1e+0At2g05530glycine-rich proteinC.G.S.X.
0.031e-138GmaAffx.60067.1.S1_atBG651457--1e-3At2g41990unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-136Arabidopsis thalianaAt1g19300838512PARVUS (PARVUS)The PARVUS/GLZ1 gene encodes a putative family 8 glycosyl transferase that contributes to xylan biosynthesis. Its gene expression shows good co-variance with the IRX3 gene involved in secondary cell wall synthesis. PARVUS/GLZ1 is predicted to have galacturonosyltransferase activity and may be involved in the formation of the complex oligosaccharide sequence present at the reducing end of xylan. PARVUS is expressed in cells undergoing secondary wall thickening, and parvus mutants have thinner cell walls.---C.G.S.X.
0.044e-238Hordeum vulgareContig14554_s_atContig14554--7e+0At5g06240emb2735 (embryo defective 2735)C.G.S.X.
0.033e-344Oryza sativaOs01g0201400AK070397.1-Rapid ALkalinization Factor family protein1e-1At1g27390TOM20-2 (TRANSLOCASE OUTER MEMBRANE 20-2)C.G.S.X.
0.052e+034Populus trichocarpaPtpAffx.43837.1.A1_s_atCV256587hypothetical protein-3e-6At4g24026unknown proteinC.G.S.X.
0.041e-344Triticum aestivumTa.6937.2.S1_x_atCA697851--1e+0At2g11005glycine-rich proteinC.G.S.X.
0.034e-134Vitis vinifera1622717_s_atCF606082--2e-1At5g65590Dof-type zinc finger domain-containing proteinC.G.S.X.
0.059e-340Zea maysZm.3288.1.A1_atCK347415immediate-early protein RSP40-2e-2At3g09032unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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