Gene omics information

Query gene ID	PsAffx.psZG005xN22f_s_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.59	79.5	PsAffx.psZG005xN22f_s_at	PsAffx.psZG005xN22f	-	-	9e+0	At5g14602	unknown protein	S.X.	H.G.	Please select
0.67	86.1	PsAffx.C86000041_at	PsAffx.C86000041	-	-	2e-1	At1g31330	PSAF (photosystem I subunit F)	S.X.	H.G.	Please select
0.43	60.6	PsAffx.C32000038_at	PsAffx.C32000038	-	-	2e-2	At2g37590	Dof-type zinc finger domain-containing protein	S.X.	H.G.	Please select
0.24	30.9	PsAffx.C192000031_at	PsAffx.C192000031	-	-	2e+0	At4g22420	-	S.X.	H.G.	Please select
0.19	23.7	GmaAffx.89500.1.A1_at	CK605776	-	-	1e+1	At5g48860	unknown protein	S.X.	H.G.	Please select
0.06	9.0	PsAffx.C59000014_at	PsAffx.C59000014	-	-	1e-1	At5g53910	(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
98.1	100.0	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
46.5	99.9	GSM292448	49_C110.1G.V7G1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
46.2	99.9	GSM294268	23_2428.2I.R297P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
32.6	99.9	GSM293082	81_C019.1N.R9N1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
25.5	99.8	GSM292169	24_1018.1A.R010P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
23.3	99.8	GSM292838	18_C211.1L.SLL3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
17.4	99.7	GSM293641	68_2065.2B.R129U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
15.6	99.6	GSM244813	18_VP9.I5U4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
12.9	99.5	GSM293614	43_2066.2B.R129P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.2	99.5	GSM293195	77_1130.1O.R082P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.31	6e-165	579	PsAffx.C23000122_at	PsAffx.C23000122	-	-	1e-2	At1g42990	ATBZIP60 (BASIC REGION/LEUCINE ZIPPER MOTIF 60)	C.G.	S.X.	Please select
0.04	2e-1	36	PsAffx.psZS006xN05f_at	PsAffx.psZS006xN05f	-	-	1e+0	At4g34290	SWIB complex BAF60b domain-containing protein	C.G.	S.X.	Please select
0.03	2e-1	36	PsAffx.C102000026_at	PsAffx.C102000026	-	-	3e-2	At2g14890	AGP9 (ARABINOGALACTAN PROTEIN 9)	C.G.	S.X.	Please select
0.03	8e-1	34	PsAffx.psHB041xP14f_at	PsAffx.psHB041xP14f	-	-	1e+0	At1g04330	unknown protein	C.G.	S.X.	Please select
0.04	8e-1	34	PsAffx.CL215Contig1_at	PsAffx.CL215Contig1	-	-	5e+0	At3g28590	unknown protein	C.G.	S.X.	Please select
0.01	8e-1	34	PsAffx.C94000018_at	PsAffx.C94000018	-	-	2e+0	At1g18335	GCN5-related N-acetyltransferase (GNAT) family protein	C.G.	S.X.	Please select
0.03	8e-1	34	PsAffx.C74000072_at	PsAffx.C74000072	-	-	3e+1	At5g50660	unknown protein	C.G.	S.X.	Please select
0.01	8e-1	34	PsAffx.C75000069_at	PsAffx.C75000069	-	-	3e-1	At1g14760	KNATM (KNOX ARABIDOPSIS THALIANA MEINOX)	C.G.	S.X.	Please select
0.01	8e-1	34	PsAffx.C73000030_at	PsAffx.C73000030	-	-	6e+0	At1g75350	emb2184 (embryo defective 2184)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	9e+0	30	Arabidopsis thaliana	At5g14602	6240992	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	3e-1	34	Hordeum vulgare	HV_CEa0002I10r2_at	HV_CEa0002I10r2	-	-	1e+0	At5g42780	AtHB27 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 27)	C.G.	S.X.	Please select
0.04	7e-2	38	Oryza sativa	OsAffx.9656.2.A1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	3e+0	32	Populus trichocarpa	PtpAffx.220524.1.S1_at	pmrna36926	hypothetical protein	-	3e+0	At3g45180	ubiquitin family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	6e-4	44	Triticum aestivum	TaAffx.85069.1.S1_at	CA625886	-	-	1e+0	At4g32295	unknown protein	C.G.	S.X.	Please select
0.04	1e+1	28	Vitis vinifera	1608347_at	BQ794038	hypothetical protein LOC100265838	-	8e-5	At4g13615	four F5 protein-related / 4F5 protein-related	C.G.	S.X.	Please select
0.07	6e-2	36	Zea mays	Zm.11992.1.A1_at	BM382475	-	-	3e+0	At5g41614	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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