Gene omics information

Query gene ID PsAffx.psZG001xD04f_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6PsAffx.psZG001xD04f_atPsAffx.psZG001xD04f--3e+0At5g50080DNA binding / transcription factorS.X.H.G.
0.5576.3PsAffx.C186000004_atPsAffx.C186000004--1e+1At4g39675unknown proteinS.X.H.G.
0.2735.7PsAffx.psMA013xM01f_s_atPsAffx.psMA013xM01f--1e+0At5g66450phosphatidic acid phosphatase-related / PAP2-relatedS.X.H.G.
0.0912.0PsAffx.C54000014_atPsAffx.C54000014--3e+0At5g66210CPK28S.X.H.G.
0.035.8PsAffx.C61000014_atPsAffx.C61000014--3e-10At5g09730BXL3 (beta-xylosidase 3)S.X.H.G.
0.001.4PsAffx.C79000062_atPsAffx.C79000062--2e-2At5g64905PROPEP3 (Elicitor peptide 3 precursor)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
87.4100.0GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
34.299.9GSM147946Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
20.699.7GSM24478411_VP9.I5L4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
18.399.7GSM29442782_2447.2J.R119L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
17.899.7GSM29216924_1018.1A.R010P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
17.699.7GSM201104Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
17.499.7GSM24479714_VP9.I2W2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
17.099.7GSM24479614_SLO.I5L1.CEL, Experimental replicate 1GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
16.399.6GSM24482921_VP9.I3U1.CEL, Experimental replicate 1GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
16.299.6GSM147956Laser capture microdissected (LCM) outer integument at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stage
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-342PsAffx.C4000033_atPsAffx.C4000033--5e-1At3g25640unknown proteinC.G.S.X.
0.048e-238PsAffx.C182000012_atPsAffx.C182000012--2e-2At2g34120unknown proteinC.G.S.X.
0.023e-136PsAffx.CL720Contig1_atPsAffx.CL720Contig1--8e+0At3g43574unknown proteinC.G.S.X.
0.013e-136PsAffx.C90000018_atPsAffx.C90000018--3e-2At5g42820U2AF35BC.G.S.X.
0.013e-136PsAffx.C76000052_atPsAffx.C76000052--1e-1At3g13820F-box family proteinC.G.S.X.
0.013e-136PsAffx.C73000057_atPsAffx.C73000057--7e-1At1g61930unknown proteinC.G.S.X.
0.013e-136PsAffx.C50000028_atPsAffx.C50000028--5e-2At5g40630ubiquitin family proteinC.G.S.X.
0.013e-136PsAffx.C49000026_atPsAffx.C49000026--2e-3At4g17620glycine-rich proteinC.G.S.X.
0.013e-136PsAffx.C14000109_atPsAffx.C14000109--3e+0At2g17560HMGB4 (HIGH MOBILITY GROUP B 4)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e+032Arabidopsis thalianaAt5g50080835072DNA binding / transcription factorencodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.---C.G.S.X.
0.041e-136Hordeum vulgareContig2647_s_atContig2647--5e-15At4g3198560S ribosomal protein L39 (RPL39C)C.G.S.X.
0.054e-136Oryza sativaOs.5123.1.S1_at---0C.G.S.X.
0.048e-238Populus trichocarpaPtpAffx.158102.1.A1_atDN486037--2e-1Atmg00120-C.G.S.X.
0.042e-136Triticum aestivumTa.21840.1.S1_atCA704487--6e-2At2g2521060S ribosomal protein L39 (RPL39A)C.G.S.X.
0.033e-134Vitis vinifera1611873_s_atCD004402hypothetical protein LOC100256289-2e-2At2g36740SWC2C.G.S.X.
0.046e-340Zea maysZm.8773.1.A1_atBM267025hypothetical protein LOC100274036-3e-2At3g20390endoribonuclease L-PSP family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage