Gene omics information

Query gene ID PsAffx.psMC009xE23f_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4665.5PsAffx.psMC009xE23f_atPsAffx.psMC009xE23f--1e+1At5g03550-S.X.H.G.
0.6080.7GmaAffx.60715.1.S1_atBU089784--5e+0At5g53400nuclear movement family proteinS.X.H.G.
0.6080.7HgAffx.3584.1.A1_s_atCK349106--2e+0At2g37110unknown proteinS.X.H.G.
0.5576.3PsAffx.CL1893Contig1_atPsAffx.CL1893Contig1--1e-1At5g42980ATTRX3 (THIOREDOXIN 3)S.X.H.G.
0.5576.3GmaAffx.60715.1.S1_x_atBU089784--5e+0At5g53400nuclear movement family proteinS.X.H.G.
0.4360.6PsAffx.C10000051_atPsAffx.C10000051--1e+0At5g09805IDL3 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 3)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
47.199.9GSM1717034_W.E.I.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
41.799.9GSM29442883_2450.2J.R161P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
33.699.9GSM29321393_C039.1O.SLO1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
30.999.9GSM29435315_2459.2J.R291L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
30.799.8GSM29430354_3153.2I.R9I2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
28.599.8GSM147950Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stage
24.199.8GSM2943803_2464.2J.R260P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
24.099.8GSM29439250_2433.2J.R090U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
23.499.8GSM29443690_2445.2J.R294U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
22.799.8GSM29449459_3189.2K.SLK2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e-136PsAffx.C181000036_atPsAffx.C181000036--4e+0At3g29170unknown proteinC.G.S.X.
0.052e-136Gma.5093.2.S1_a_atBU764362plastid 3-keto-acyl-ACP synthase II-B /// beta-ketoacyl-ACP synthetase 2-4e-83At1g74960FAB1 (FATTY ACID BIOSYNTHESIS 1)C.G.S.X.
0.019e-134PsAffx.C90000046_atPsAffx.C90000046--2e+0At2g27920SCPL51 (SERINE CARBOXYPEPTIDASE-LIKE 51)C.G.S.X.
0.039e-134PsAffx.C17000089_atPsAffx.C17000089--5e+0At2g28160FRU (FER-LIKE REGULATOR OF IRON UPTAKE)C.G.S.X.
0.039e-134GmaAffx.90598.1.S1_atCF806323WRKY34 protein-2e-24At4g22070WRKY31C.G.S.X.
0.049e-134GmaAffx.83326.2.S1_atBU081884WRKY34 protein-2e-23At4g22070WRKY31C.G.S.X.
0.049e-134GmaAffx.83326.2.S1_s_atBU081884WRKY34 protein-2e-23At4g22070WRKY31C.G.S.X.
0.034e+032PsAffx.CL772Contig1_atPsAffx.CL772Contig1--2e+1At5g23250succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putativeC.G.S.X.
0.024e+032PsAffx.C8000085_atPsAffx.C8000085--1e+1At5g07110PRA1.B6 (PRENYLATED RAB ACCEPTOR 1.B6)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e+130Arabidopsis thalianaAt5g03550831790-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.041e+032Hordeum vulgareContig23845_atContig23845--3e-1At3g45577tRNA-intron endonucleaseC.G.S.X.
0.083e-136Oryza sativaOsAffx.3890.1.S1_at---0C.G.S.X.
0.032e-136Populus trichocarpaPtpAffx.158716.1.S1_atAJ768557hypothetical protein-2e-2At5g22930unknown proteinC.G.S.X.
0.057e-134Triticum aestivumTa.4030.1.S1_atBJ262772--5e+0At1g48530-C.G.S.X.
0.043e+030Vitis vinifera1613752_atCF513775--8e-1At5g12235CLE22 (CLAVATA3/ESR-RELATED 22)C.G.S.X.
0.024e+030Zea maysZm.2776.1.A1_atAW067203asparagine synthase family protein-2e+0At2g03667asparagine synthase (glutamine-hydrolyzing)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage