Gene omics information

Query gene ID PsAffx.psMC002xG13f_s_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6PsAffx.psMC002xG13f_s_atPsAffx.psMC002xG13f--2e+0At1g23980zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.035.8GmaAffx.65235.1.A1_atBU544694--4e+0At3g12510unknown proteinS.X.H.G.
0.024.5GmaAffx.85491.1.S1_s_atBE583694--1e+1At5g26692-S.X.H.G.
0.013.4PsAffx.C3000160_s_atPsAffx.C3000160--4e+0At5g42860unknown proteinS.X.H.G.
0.001.4GmaAffx.93324.1.S1_atCF809049--1e-3At2g14720VSR-2S.X.H.G.
0.001.4GmaAffx.90824.1.S1_atCF806549--3e-84At1g0481026S proteasome regulatory subunit, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
40.799.9GSM1717136_Z.C.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
24.899.8GSM29435012_2445.2J.R294L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
19.299.7GSM2449093_VP9.I3L2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
18.699.7GSM24485027_CON.I3L2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
18.399.7GSM29443791_2465.2J.R186U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
17.899.7GSM24484626_CON.I1W3.CEL, Experimental replicate 3GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
16.499.6GSM29260433_1346.1I.R217P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
16.299.6GSM29442883_2450.2J.R161P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
16.099.6GSM24491140_SLO.M2W3.CEL, Experimental replicate 3GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
16.099.6GSM24488133_VP9.I1W2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000640PsAffx.psMC002xG13f_atPsAffx.psMC002xG13f--2e+0At1g23980zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.403e-96351PsAffx.C103000003_atPsAffx.C103000003--7e+0At4g21200GA2OX8 (GIBBERELLIN 2-OXIDASE 8)C.G.S.X.
0.232e-859PsAffx.psMC011xF05f_atPsAffx.psMC011xF05f--5e-2At3g06590transcription factorC.G.S.X.
0.022e-859PsAffx.C31000056_atPsAffx.C31000056--2e-1At2g2045060S ribosomal protein L14 (RPL14A)C.G.S.X.
0.056e-548PsAffx.C111000012_atPsAffx.C111000012--3e-1At5g63970copine-relatedC.G.S.X.
0.036e-238PsAffx.C228000024_atPsAffx.C228000024--5e-1At5g60700glycosyltransferase family protein 2C.G.S.X.
0.012e-136PsAffx.C52000057_atPsAffx.C52000057--2e+0At5g02850hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.032e-136PsAffx.C136000020_atPsAffx.C136000020--5e-1At2g22425peptidaseC.G.S.X.
0.029e-134PsAffx.C81000026_atPsAffx.C81000026--3e+0At5g53470ACBP1 (ACYL-COA BINDING PROTEIN 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+032Arabidopsis thalianaAt1g23980839010zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB---C.G.S.X.
0.053e-134Hordeum vulgareContig21982_atContig21982--3e+0At5g66658unknown proteinC.G.S.X.
0.051e+034Oryza sativaOsAffx.4935.1.A1_at---0C.G.S.X.
0.043e+032Populus trichocarpaPtpAffx.220904.1.S1_atpmrna37379hypothetical protein-4e+0At5g57625allergen V5/Tpx-1-related family proteinC.G.S.X.
0.056e-134Triticum aestivumTaAffx.22952.1.S1_atCA742761--1e-17At4g13590unknown proteinC.G.S.X.
0.053e+030Vitis vinifera1622261_atBQ798242hypothetical protein LOC100245316-5e-34At1g29850double-stranded DNA-binding family proteinC.G.S.X.
0.044e+030Zea maysZm.6754.1.A1_atAI396158hypothetical protein LOC100279965-4e-2At4g36530hydrolase, alpha/beta fold family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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