Gene omics information

Query gene ID	PsAffx.psHA008iB01r_s_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	PsAffx.psHA008iB01r_s_at	PsAffx.psHA008iB01r	-	-	3e+0	At3g19800	unknown protein	S.X.	H.G.	Please select
0.60	80.7	HgAffx.13668.1.S1_at	CB374314	-	-	6e-1	At5g49710	unknown protein	S.X.	H.G.	Please select
0.40	57.1	HgAffx.17965.1.S1_at	CB278425	-	-	2e+0	At2g23340	AP2 domain-containing transcription factor, putative	S.X.	H.G.	Please select
0.33	46.1	GmaAffx.12608.1.A1_at	BE583858	-	-	2e-1	At3g46380	unknown protein	S.X.	H.G.	Please select
0.03	5.8	GmaAffx.83815.1.S1_s_at	BG404904	-	-	1e+0	At1g04330	unknown protein	S.X.	H.G.	Please select
0.03	5.8	Gma.1143.1.A1_at	AW278604	-	-	4e-6	At2g16860	GCIP-interacting family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
22.9	99.8	GSM292838	18_C211.1L.SLL3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
18.4	99.7	GSM292448	49_C110.1G.V7G1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
15.9	99.6	GSM292169	24_1018.1A.R010P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
15.8	99.6	GSM244915	4_SLO.I3L3.CEL, Experimental replicate 3	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
15.1	99.6	GSM244931	8_SLO.I5L4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
11.5	99.4	GSM294268	23_2428.2I.R297P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.7	99.3	GSM293195	77_1130.1O.R082P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.6	99.2	GSM244920	5_VP9.I5L2.CEL, Experimental replicate 2	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
8.7	99.1	GSM244890	36_SLO.I2W2.CEL, Experimental replicate 2	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
8.3	99.1	GSM292892	67_1464.1L.R282P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.41	2e-107	389	PsAffx.C36000051_at	PsAffx.C36000051	-	-	1e+0	At2g02030	F-box family protein	C.G.	S.X.	Please select
0.51	4e-105	381	GmaAffx.17151.1.A1_at	BE583508	-	-	3e+0	At3g19800	unknown protein	C.G.	S.X.	Please select
0.10	6e-30	131	PsAffx.C234000012_at	PsAffx.C234000012	-	-	1e+0	At2g17180	zinc finger (C2H2 type) family protein	C.G.	S.X.	Please select
0.13	2e-5	50	PsAffx.C43000016_at	PsAffx.C43000016	-	-	5e+0	At3g26445	glycosyl transferase family 17 protein	C.G.	S.X.	Please select
0.01	7e-2	38	PsAffx.C286000004_at	PsAffx.C286000004	-	-	2e+0	At2g28660	copper-binding family protein	C.G.	S.X.	Please select
0.04	1e+0	34	PsAffx.C99000045_at	PsAffx.C99000045	-	-	5e+0	At5g25425	glycine-rich protein	C.G.	S.X.	Please select
0.02	1e+0	34	PsAffx.C79000038_at	PsAffx.C79000038	-	-	3e+0	At4g19820	glycosyl hydrolase family 18 protein	C.G.	S.X.	Please select
0.01	1e+0	34	PsAffx.C72000035_at	PsAffx.C72000035	-	-	4e+0	At4g04470	PMP22	C.G.	S.X.	Please select
0.04	1e+0	34	GmaAffx.53768.1.A1_at	BE660625	Allene oxide synthase (aos1)	-	4e+0	At3g11260	WOX5 (WUSCHEL RELATED HOMEOBOX 5)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e+0	32	Arabidopsis thaliana	At3g19800	821517	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	6e+0	30	Hordeum vulgare	Contig24700_at	Contig24700	-	-	2e-1	At4g12970	unknown protein	C.G.	S.X.	Please select
0.04	6e+0	32	Oryza sativa	Os11g0592100	AY435041.1	-	Barwin	6e-3	At3g04720	PR4 (PATHOGENESIS-RELATED 4)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	4e+0	32	Populus trichocarpa	PtpAffx.219865.1.S1_at	pmrna36019	hypothetical protein	-	7e+0	At5g11680	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	3e+0	32	Triticum aestivum	TaAffx.97030.3.S1_at	CA716069	-	-	4e+0	At3g01330	DEL3 (DP-E2F-LIKE PROTEIN 3)	C.G.	S.X.	Please select
0.04	6e-2	36	Vitis vinifera	1619939_at	CB971326	-	-	2e+1	At5g43430	ETFBETA	C.G.	S.X.	Please select
0.04	3e-1	34	Zea mays	Zm.34.6.A1_x_at	AI833621	hypothetical protein LOC100101517 /// hypothetical protein LOC100279023 /// opaque2 modifier	-	3e+0	At1g31310	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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