CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID PsAffx.psHA006iH10r_s_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 86.1 PsAffx.psHA006iH10r_s_at PsAffx.psHA006iH10r - - 1e+0 At2g28140 unknown protein S.X. H.G.
0.50 71.7 GmaAffx.58176.1.S1_at BU577254 - - 3e-1 At2g39540 gibberellin-regulated family protein S.X. H.G.
0.44 63.3 Gma.4792.2.S1_at AW203826 - - 1e-2 At1g21780 BTB/POZ domain-containing protein S.X. H.G.
0.40 57.1 GmaAffx.24666.1.S1_at CA783210 - - 2e-1 At2g39705 RTFL8 (ROTUNDIFOLIA LIKE 8) S.X. H.G.
0.32 43.7 Gma.11997.1.S1_at BI971274 - - 5e-7 At1g61065 unknown protein S.X. H.G.
0.15 18.7 GmaAffx.65140.1.S1_at BI700031 - - 7e-2 At4g33670 L-galactose dehydrogenase (L-GalDH) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.6 98.7 GSM293613 42_2054.2B.R307P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.6 98.3 GSM293586 18_2092.2B.R298P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.3 98.2 GSM293593 24_2082.2B.R035P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4 97.6 GSM293639 66_2084.2B.R288P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3 97.5 GSM292851 2_1450.1L.R275P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3 97.5 GSM292874 50_1456.1L.R278P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0 97.2 GSM293565 78_2006.2A.R146P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7 96.8 GSM293772 18_2164.2D.R027P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7 96.8 GSM293956 13_2286.2F.R031P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5 96.6 GSM293254 40_1540.1P.R050P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.64 0 1039 GmaAffx.93422.1.S1_at CF806182 - - 2e-10 At1g19397 unknown protein C.G. S.X.
0.24 2e-73 276 Gma.2590.2.S1_at CD414388 - - 9e-8 At1g19397 unknown protein C.G. S.X.
0.04 1e-1 38 GmaAffx.83420.1.S1_at BU091686 - - 5e-5 At1g73840 ESP1 (ENHANCED SILENCING PHENOTYPE 1) C.G. S.X.
0.04 1e-1 38 Gma.5888.2.S1_at BQ785169 - - 9e-6 At1g19397 unknown protein C.G. S.X.
0.04 4e-1 36 GmaAffx.92374.1.S1_s_at CF808099 - - 9e-1 At2g19200 unknown protein C.G. S.X.
0.04 4e-1 36 GmaAffx.92374.1.S1_at CF808099 - - 9e-1 At2g19200 unknown protein C.G. S.X.
0.04 4e-1 36 Gma.9367.1.S1_at CA783768 - - 4e-1 At5g62130 Per1-like protein-related C.G. S.X.
0.03 2e+0 34 PsAffx.CL1044Contig1_at PsAffx.CL1044Contig1 - - 5e+0 At4g00525 unknown protein C.G. S.X.
0.02 2e+0 34 PsAffx.C85000023_at PsAffx.C85000023 - - 2e-1 At5g66380 ATFOLT1 (ARABIDOPSIS THALIANA FOLATE TRANSPORTER 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 Arabidopsis thaliana At2g28140 817360 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PA - - - C.G. S.X.
0.04 2e+0 32 Hordeum vulgare EBma01_SQ002_F07_s_at EBma01_SQ002_F07 - - 2e+0 At3g18460 unknown protein C.G. S.X.
0.04 8e+0 32 Oryza sativa OsAffx.875.1.S1_at - - - 0 C.G. S.X.
0.04 4e-1 36 Populus trichocarpa PtpAffx.224117.1.S1_at pmrna42356 hypothetical protein - 2e-1 At1g29610 - C.G. S.X.
0.04 4e+0 32 Triticum aestivum TaAffx.4181.1.S1_at CB884222 - - 5e-1 At2g36724 unknown protein C.G. S.X.
0.04 5e+0 30 Vitis vinifera 1617952_at CD802466 - - 2e+0 At1g60000 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative C.G. S.X.
0.03 1e-1 36 Zea mays Zm.17505.1.S1_at BM078530 - - 3e-7 At5g66410 PLP3b (Phosducin-like protein 3 homolog) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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