Gene omics information

Query gene ID PsAffx.CL55Contig1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7187.8PsAffx.CL55Contig1_atPsAffx.CL55Contig1--4e-7At3g1460060S ribosomal protein L18A (RPL18aC)S.X.H.G.
0.8091.5PsAffx.CL36Contig1_atPsAffx.CL36Contig1--1e+0At1g22780PFL (POINTED FIRST LEAVES)S.X.H.G.
0.7388.9PsAffx.CL21Contig1_atPsAffx.CL21Contig1--1e-6At5g0951040S ribosomal protein S15 (RPS15D)S.X.H.G.
0.6786.1PsAffx.CL47Contig1_atPsAffx.CL47Contig1--2e-2At2g39460RPL23AA (RIBOSOMAL PROTEIN L23AA)S.X.H.G.
0.6181.8PsAffx.CL23Contig1_atPsAffx.CL23Contig1--5e+0At4g02040unknown proteinS.X.H.G.
0.5071.7GmaAffx.80905.1.S1_s_atBE583527--4e-2At2g4346060S ribosomal protein L38 (RPL38A)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
104.3100.0GSM17167528_W.I.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
78.9100.0GSM17161113_W.E.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
58.699.9GSM17169331_Z.I.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
56.999.9GSM17161915_W.F.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
54.999.9GSM17166024_Y.I.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
53.899.9GSM17160612_V.I.M.5, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
53.299.9GSM29430354_3153.2I.R9I2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
53.099.9GSM17168029_Y.F.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
48.999.9GSM17166425_Y.E.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
47.899.9GSM1717259_Z.F.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.730652PsAffx.psZO010iD11r_s_atPsAffx.psZO010iD11r--1e-3At3g1460060S ribosomal protein L18A (RPL18aC)C.G.S.X.
0.026e-1685PsAffx.C172000013_atPsAffx.C172000013--9e-2At2g06904nucleic acid binding / zinc ion bindingC.G.S.X.
0.129e-1581PsAffx.psMA003xI10f_atPsAffx.psMA003xI10f--4e-4At2g3448060S ribosomal protein L18A (RPL18aB)C.G.S.X.
0.091e-1067HgAffx.17597.1.S1_atCB278793--4e-6At3g1460060S ribosomal protein L18A (RPL18aC)C.G.S.X.
0.081e-757HgAffx.17636.1.S1_atCB374789--1e-6At3g1460060S ribosomal protein L18A (RPL18aC)C.G.S.X.
0.045e-756Gma.11251.2.S1_atCD400392--1e-90At2g3448060S ribosomal protein L18A (RPL18aB)C.G.S.X.
0.031e-448GmaAffx.89631.1.A1_atCK606099--3e-79At2g3448060S ribosomal protein L18A (RPL18aB)C.G.S.X.
0.031e-448GmaAffx.89631.1.A1_x_atCK606099--3e-79At2g3448060S ribosomal protein L18A (RPL18aB)C.G.S.X.
0.031e-448GmaAffx.89631.1.S1_atCK606099--3e-79At2g3448060S ribosomal protein L18A (RPL18aB)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.074e-756Arabidopsis thalianaAt3g1460082068860S ribosomal protein L18A (RPL18aC)F:structural constituent of ribosome;P:N-terminal protein myristoylation, translation, ribosome biogenesis;C:cytosolic ribosome, cytosolic large ribosomal subunit, ribosome, membrane;MOFP---C.G.S.X.
0.132e-446Hordeum vulgareEBro08_SQ004_O17_atEBro08_SQ004_O17--3e-7At3g1460060S ribosomal protein L18A (RPL18aC)C.G.S.X.
0.153e-654Oryza sativaOs01g0752300AK121755.1-60S ribosomal protein L18a-11e-87At2g3448060S ribosomal protein L18A (RPL18aB)C.G.S.X.
0.142e-963Populus trichocarpaPtpAffx.17721.1.A1_atCV275236--3e-4At3g1460060S ribosomal protein L18A (RPL18aC)C.G.S.X.
0.123e-2099Triticum aestivumTaAffx.91894.1.S1_atBJ294717--2e-6At2g3448060S ribosomal protein L18A (RPL18aB)C.G.S.X.
0.071e-446Vitis vinifera1608129_atCF372430hypothetical protein LOC100265789-1e-87At2g3448060S ribosomal protein L18A (RPL18aB)C.G.S.X.
0.144e-857Zea maysZm.16532.4.S1_atBI423682--7e-68At2g3448060S ribosomal protein L18A (RPL18aB)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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