Gene omics information

Query gene ID PsAffx.CL122Contig1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5778.8PsAffx.CL122Contig1_atPsAffx.CL122Contig1--1e-1At3g56350superoxide dismutase (Mn), putative / manganese superoxide dismutase, putativeS.X.H.G.
0.9298.9PsAffx.CL377Contig1_atPsAffx.CL377Contig1--8e+0At5g58640selenoprotein-relatedS.X.H.G.
0.7388.9PsAffx.CL72Contig2_atPsAffx.CL72Contig2--3e-1At2g25190unknown proteinS.X.H.G.
0.6986.8PsAffx.C191000027_atPsAffx.C191000027--7e-1At2g20420succinyl-CoA ligase (GDP-forming) beta-chain, mitochondrial, putative / succinyl-CoA synthetase, beta chain, putative / SCS-beta, putativeS.X.H.G.
0.6786.1PsAffx.CL136Contig1_atPsAffx.CL136Contig1--2e+0At1g28580GDSL-motif lipase, putativeS.X.H.G.
0.6382.9PsAffx.CL111Contig1_atPsAffx.CL111Contig1--9e+0At3g02000ROXY1S.X.H.G.
0.6181.8PsAffx.CL13Contig1_atPsAffx.CL13Contig1--7e-2At5g4004060S acidic ribosomal protein P2 (RPP2E)S.X.H.G.
0.5878.8PsAffx.C65000037_s_atPsAffx.C65000037--9e-10At5g08680ATP synthase beta chain, mitochondrial, putativeS.X.H.G.
0.5678.2PsAffx.CL89Contig1_atPsAffx.CL89Contig1--2e-1At1g59900AT-E1 ALPHAS.X.H.G.
0.5576.3PsAffx.CL483Contig1_atPsAffx.CL483Contig1--8e+0At4g01670unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
132.7100.0GSM1717034_W.E.I.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
113.7100.0GSM29430354_3153.2I.R9I2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
94.6100.0GSM2940924_3111.2G.R9G1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
72.1100.0GSM17167528_W.I.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
63.399.9GSM17161113_W.E.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
54.799.9GSM29415116_3139.2H.R9H3L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
51.999.9GSM17161915_W.F.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
48.899.9GSM17169331_Z.I.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
47.099.9GSM29238459_C093.1F.R9F1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
43.899.9GSM29375688_2113.2C.R285L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.093e-654PsAffx.CL1401Contig1_atPsAffx.CL1401Contig1--2e-5At3g56350superoxide dismutase (Mn), putative / manganese superoxide dismutase, putativeC.G.S.X.
0.031e-242PsAffx.CL1694Contig1_atPsAffx.CL1694Contig1--9e-3At5g03370acylphosphatase familyC.G.S.X.
0.034e-240PsAffx.C63000027_atPsAffx.C63000027--1e+1At5g40451unknown proteinC.G.S.X.
0.044e-240PsAffx.C278000010_atPsAffx.C278000010--9e+0At1g25520unknown proteinC.G.S.X.
0.022e-138PsAffx.CL854Contig1_atPsAffx.CL854Contig1--2e+0At4g3920040S ribosomal protein S25 (RPS25E)C.G.S.X.
0.012e-138PsAffx.C163000021_atPsAffx.C163000021--2e-1At1g73530RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.027e-136PsAffx.psZS008xF11f_atPsAffx.psZS008xF11f--4e+0At1g02710glycine-rich proteinC.G.S.X.
0.017e-136PsAffx.C7000238_atPsAffx.C7000238--1e+0At4g18070unknown proteinC.G.S.X.
0.017e-136PsAffx.C18000054_atPsAffx.C18000054--4e+0At1g68850peroxidase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-138Arabidopsis thalianaAt3g56350824802superoxide dismutase (Mn), putative / manganese superoxide dismutase, putativeF:superoxide dismutase activity, metal ion binding;P:superoxide metabolic process, removal of superoxide radicals;C:mitochondrion, endomembrane system;BOFMPAV---C.G.S.X.
0.036e-238Hordeum vulgareHT09G06u_atHT09G06u--4e+0At3g27210unknown proteinC.G.S.X.
0.029e-136Oryza sativaOs09g03145009637.m01163-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein5e-1At5g44570unknown proteinC.G.S.X.
0.032e-138Populus trichocarpaPtpAffx.214713.1.S1_atpmrna28537hypothetical protein-2e+1At5g08520myb family transcription factorC.G.S.X.
0.033e-240Triticum aestivumTa.1625.1.S1_atBE444237--2e+1At5g42825unknown proteinC.G.S.X.
0.021e-136Vitis vinifera1611601_atCB977009hypothetical protein LOC100245304-2e+0At3g62820invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
0.028e-134Zea maysZm.13849.1.S1_atCD962380ATP10 protein-2e+0At1g08220-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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