Gene omics information

Query gene ID PsAffx.CL111Contig1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6PsAffx.CL111Contig1_atPsAffx.CL111Contig1--9e+0At3g02000ROXY1S.X.H.G.
0.8091.5PsAffx.CL221Contig1_atPsAffx.CL221Contig1--2e+0At5g24460unknown proteinS.X.H.G.
0.7790.3PsAffx.CL136Contig1_atPsAffx.CL136Contig1--2e+0At1g28580GDSL-motif lipase, putativeS.X.H.G.
0.5374.2PsAffx.C65000037_s_atPsAffx.C65000037--9e-10At5g08680ATP synthase beta chain, mitochondrial, putativeS.X.H.G.
0.5071.7PsAffx.CL72Contig2_atPsAffx.CL72Contig2--3e-1At2g25190unknown proteinS.X.H.G.
0.3853.3PsAffx.CL74Contig1_atPsAffx.CL74Contig1--4e-16At4g38740ROC1 (ROTAMASE CYP 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
129.4100.0GSM29430354_3153.2I.R9I2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
88.3100.0GSM29311328_C047.1O.R9O2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
74.7100.0GSM1717034_W.E.I.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
66.3100.0GSM2940924_3111.2G.R9G1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
56.499.9GSM17167528_W.I.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
54.699.9GSM29322615_C065.1P.R9P2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
52.299.9GSM29301520_1089.1N.R055L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
47.399.9GSM29238459_C093.1F.R9F1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
45.799.9GSM29340890_C079.1Q.R9Q2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
45.299.9GSM29415116_3139.2H.R9H3L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-344PsAffx.C39000059_atPsAffx.C39000059--2e-1At4g34970ADF9 (ACTIN DEPOLYMERIZING FACTOR 9)C.G.S.X.
0.015e-240PsAffx.C43000081_atPsAffx.C43000081--9e-1At4g25434ATNUDT10 (Arabidopsis thaliana Nudix hydrolase homolog 10)C.G.S.X.
0.015e-240PsAffx.C107000017_atPsAffx.C107000017--7e-1At5g14520pescadillo-relatedC.G.S.X.
0.035e-240HgAffx.1750.1.S1_atCK350940--3e+0At5g11260HY5 (ELONGATED HYPOCOTYL 5)C.G.S.X.
0.022e-138PsAffx.C99000034_atPsAffx.C99000034--2e+1At5g25940early nodulin-relatedC.G.S.X.
0.022e-138PsAffx.C81000051_atPsAffx.C81000051--2e+1At5g52570BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2)C.G.S.X.
0.012e-138PsAffx.C57000069_atPsAffx.C57000069--1e+1At5g23230NIC2 (NICOTINAMIDASE 2)C.G.S.X.
0.012e-138PsAffx.C125000026_atPsAffx.C125000026--2e+0At3g55710UDP-glucoronosyl/UDP-glucosyl transferase family proteinC.G.S.X.
0.018e-136PsAffx.C24000049_atPsAffx.C24000049--9e-1At3g07810heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.029e+032Arabidopsis thalianaAt3g02000820200ROXY1Roxy1 encodes a glutaredoxin belonging to a subgroup specific to higher plants. It is required for proper petal initiation and organogenesis. It is likely to function in the temporal and spatial expression regulation of AGAMOUS in the first and second whorl. It's function is dependent on the Cysteine 49 residue and its nuclear localization. ROXY1 interacts in vitro and in vivo with members of the TGA family of transcription factors (e.g. TGA2, TGA3, TGA7 and PAN).---C.G.S.X.
0.027e-238Hordeum vulgareContig17189_atContig17189--5e+0At3g32930unknown proteinC.G.S.X.
0.037e-240Oryza sativaOs06g01551009634.m00537--2e+0At2g26110unknown proteinC.G.S.X.
0.023e+034Populus trichocarpaPtpAffx.220680.1.S1_atpmrna37090hypothetical protein-1e+1At5g07190ATS3 (ARABIDOPSIS THALIANA SEED GENE 3)C.G.S.X.
0.024e-240Triticum aestivumTa.10297.2.S1_atBJ244245--4e+0At5g19151unknown proteinC.G.S.X.
0.026e-134Vitis vinifera1611414_atCB976798hypothetical protein LOC100260196-1e+0At5g23420HMGB6C.G.S.X.
0.024e+032Zea maysZm.9703.1.A1_atBM348340hypothetical protein LOC100191161 /// hypothetical protein LOC100272965-5e+0Atcg01020-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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