Gene omics information

Query gene ID	PsAffx.C63000067_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	PsAffx.C63000067_at	PsAffx.C63000067	-	-	1e-1	At5g05150	AtATG18e	S.X.	H.G.	Please select
0.80	91.5	HgAffx.11003.1.S1_at	CB824101	-	-	4e+0	At3g28630	-	S.X.	H.G.	Please select
0.73	88.9	HgAffx.5776.1.S1_at	CB826435	-	-	1e+0	At5g59030	COPT1 (copper transporter 1)	S.X.	H.G.	Please select
0.67	86.1	PsAffx.C6000193_at	PsAffx.C6000193	-	-	1e+1	Atmg00450	-	S.X.	H.G.	Please select
0.63	82.9	HgAffx.24315.1.S1_at	CB374815	-	-	9e-1	At4g15930	microtubule motor	S.X.	H.G.	Please select
0.56	78.2	PsAffx.C47000085_at	PsAffx.C47000085	-	-	2e+0	At1g04350	2-oxoglutarate-dependent dioxygenase, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
1389.6	100.0	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
62.5	99.9	GSM292167	21-1019.1A.R011L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
33.6	99.9	GSM292444	45_C114.1G.SLG1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
33.6	99.9	GSM294175	38_3132.2H.R9H1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
31.5	99.9	GSM292198	5_C008.1A.V7A2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
30.4	99.8	GSM292901	75_1457.1L.R279U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
26.4	99.8	GSM294075	31_3126.2G.R9G3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
23.4	99.8	GSM293641	68_2065.2B.R129U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
22.6	99.8	GSM294337	85_2404.2I.R102P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.2	99.5	GSM244863	2_CON.M3W2.CEL, Experimental replicate 2	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	6e-4	48	PsAffx.C115000062_at	PsAffx.C115000062	-	-	1e+0	At4g30993	unknown protein	C.G.	S.X.	Please select
0.02	2e-3	46	PsAffx.CL1911Contig1_s_at	PsAffx.CL1911Contig1	-	-	2e+0	At1g26798	Expressed protein	C.G.	S.X.	Please select
0.06	2e-3	46	PsAffx.C92000049_at	PsAffx.C92000049	-	-	2e+0	At3g13200	EMB2769 (EMBRYO DEFECTIVE 2769)	C.G.	S.X.	Please select
0.01	1e-1	40	PsAffx.C122000022_at	PsAffx.C122000022	-	-	3e+0	At5g12190	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please select
0.01	1e-1	40	Gma.5969.1.S1_a_at	CD401397	-	-	2e-17	At1g67785	unknown protein	C.G.	S.X.	Please select
0.01	5e-1	38	PsAffx.CL653Contig1_at	PsAffx.CL653Contig1	-	-	6e-1	At2g04925	-	C.G.	S.X.	Please select
0.00	5e-1	38	PsAffx.C9000001_at	PsAffx.C9000001	-	-	2e-1	At1g07040	unknown protein	C.G.	S.X.	Please select
0.01	5e-1	38	PsAffx.C70000069_at	PsAffx.C70000069	-	-	2e+0	At3g51200	auxin-responsive family protein	C.G.	S.X.	Please select
0.01	5e-1	38	PsAffx.C45000031_at	PsAffx.C45000031	-	-	6e+0	At4g33420	peroxidase, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	1e-1	40	Arabidopsis thaliana	At5g05150	830397	AtATG18e	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPBA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.01	3e+0	34	Hordeum vulgare	HV_CEb0014I12f_at	HV_CEb0014I12f	-	-	3e+0	At3g52940	FK (FACKEL)	C.G.	S.X.	Please select
0.01	3e+0	36	Oryza sativa	Os05g0290300	CB633316	-	Hypothetical protein	6e+0	At4g17200	F-box family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.01	2e+0	36	Populus trichocarpa	PtpAffx.69216.1.S1_a_at	CK104529	hypothetical protein	-	8e-1	At3g24020	disease resistance-responsive family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.01	2e+0	36	Triticum aestivum	Ta.9798.1.S1_at	AY123416.1	-	-	1e-26	At1g22450	COX6B (CYTOCHROME C OXIDASE 6B)	C.G.	S.X.	Please select
0.01	2e+0	34	Vitis vinifera	1618314_at	CB976771	hypothetical protein LOC100251586	-	4e+0	At3g23715	SCRL13 (SCR-Like 13)	C.G.	S.X.	Please select
0.01	3e+0	34	Zea mays	ZmAffx.1050.1.A1_at	AI881808	-	-	3e+0	At4g35025	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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