Gene omics information

Query gene ID PsAffx.C3000058_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4057.1PsAffx.C3000058_atPsAffx.C3000058--3e-1At1g52500ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1)S.X.H.G.
0.6080.7GmaAffx.60715.1.S1_x_atBU089784--5e+0At5g53400nuclear movement family proteinS.X.H.G.
0.6080.7HgAffx.3584.1.A1_s_atCK349106--2e+0At2g37110unknown proteinS.X.H.G.
0.5979.5HgAffx.3643.1.A1_atCK349047--7e-1At1g05070unknown proteinS.X.H.G.
0.5576.3HgAffx.13905.6.S1_s_atCB378944--5e+0At4g25550protein bindingS.X.H.G.
0.5576.3GmaAffx.60715.1.S1_atBU089784--5e+0At5g53400nuclear movement family proteinS.X.H.G.
0.4259.3HgAffx.3851.1.A1_atCK348839--2e+1At5g66005Expressed proteinS.X.H.G.
0.4057.1HgAffx.19033.4.S1_s_atCK350593--6e-2At1g54410dehydrin family proteinS.X.H.G.
0.3040.4HgAffx.20910.1.S1_atBI748843--8e-1At1g55670PSAG (PHOTOSYSTEM I SUBUNIT G)S.X.H.G.
0.2126.6PsAffx.psMC009xE23f_atPsAffx.psMC009xE23f--1e+1At5g03550-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
69.3100.0GSM29222216_C029.1B.R9B2U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
56.899.9GSM17169432_V.L.M.3, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
49.299.9GSM29426823_2428.2I.R297P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
34.799.9GSM29319577_1130.1O.R082P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
25.699.8GSM29448954_3198.2K.R9K3P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
24.699.8GSM29443892_2469.2J.R237L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
24.399.8GSM29439755_2458.2J.R073P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
24.099.8GSM29435315_2459.2J.R291L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
22.899.8GSM24481118_SLO.I3L2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
21.999.8GSM29443489_2444.2J.R083P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.011e-344PsAffx.C186000012_atPsAffx.C186000012--3e+0At5g07620protein kinase family proteinC.G.S.X.
0.036e-342PsAffx.C149000018_atPsAffx.C149000018--2e+0At5g28781unknown proteinC.G.S.X.
0.039e-238PsAffx.C38000073_atPsAffx.C38000073--3e+1At5g16530PIN5 (PIN-FORMED 5)C.G.S.X.
0.039e-238PsAffx.C38000073_s_atPsAffx.C38000073--3e+1At5g16530PIN5 (PIN-FORMED 5)C.G.S.X.
0.039e-238Gma.13187.1.S1_atBG839239--5e-4At3g02910-C.G.S.X.
0.024e-136PsAffx.C76000059_atPsAffx.C76000059--8e-1At4g31460ribosomal protein L28 family proteinC.G.S.X.
0.044e-136GmaAffx.76968.1.S1_atBG044476--3e+0At2g29870major intrinsic family protein / MIP family proteinC.G.S.X.
0.011e+034PsAffx.C42000023_atPsAffx.C42000023--9e-2At5g55910D6PK (D6 PROTEIN KINASE)C.G.S.X.
0.021e+034PsAffx.C37000059_atPsAffx.C37000059--3e+0At4g0081060S acidic ribosomal protein P1 (RPP1B)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-136Arabidopsis thalianaAt1g52500841681ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1)Encodes one of the splice variants of Arabidopsis thaliana MutM homolog. Has abasic lyase activity and does not exhibit significant cleavage of a double-stranded oligonucleotide that contained 8-oxo-guanine. Sequence similarity to atmmh-1.---C.G.S.X.
0.032e+032Hordeum vulgareContig16086_atContig16086--6e-3At4g39720VQ motif-containing proteinC.G.S.X.
0.043e-240Oryza sativaOsAffx.21799.1.S1_at---0C.G.S.X.
0.046e+032Populus trichocarpaPtpAffx.76158.1.A1_atCV276299--4e+0At5g63300structural constituent of ribosomeC.G.S.X.
0.043e-136Triticum aestivumTa.5379.1.S1_atBJ287107--5e+0At4g37630CYCD5C.G.S.X.
0.031e+032Vitis vinifera1608473_atCB977301hypothetical protein LOC100256530-8e-1At4g29890choline monooxygenase, putative (CMO-like)C.G.S.X.
0.032e+032Zea maysZm.13137.3.A1_a_atAI665175--3e+0At1g54980invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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