Gene omics information

Query gene ID PsAffx.C232000020_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8392.5PsAffx.C232000020_atPsAffx.C232000020--7e-2At4g17695KAN3 (KANADI 3)S.X.H.G.
0.6886.4PsAffx.CL1633Contig1_atPsAffx.CL1633Contig1--2e+1At3g5634040S ribosomal protein S26 (RPS26C)S.X.H.G.
0.6886.4PsAffx.C77000031_s_atPsAffx.C77000031--1e-2At1g70280NHL repeat-containing proteinS.X.H.G.
0.6583.8PsAffx.C67000045_atPsAffx.C67000045--8e+0At4g19200proline-rich family proteinS.X.H.G.
0.6282.1PsAffx.C146000020_atPsAffx.C146000020--1e-2At4g39870-S.X.H.G.
0.5979.5PsAffx.psMY009iD11r_atPsAffx.psMY009iD11r--9e-1At1g10865-S.X.H.G.
0.5979.5PsAffx.C167000023_atPsAffx.C167000023--2e+0At2g36261unknown proteinS.X.H.G.
0.5979.5PsAffx.psMC003xO21f_atPsAffx.psMC003xO21f--4e+0At5g28490LSH1 (LIGHT-DEPENDENT SHORT HYPOCOTYLS 1)S.X.H.G.
0.5678.2PsAffx.CL363Contig1_atPsAffx.CL363Contig1--9e+0At3g50685unknown proteinS.X.H.G.
0.5678.2PsAffx.psHB003xD11f_atPsAffx.psHB003xD11f--4e+0At3g62336unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
89.7100.0GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
42.099.9GSM17167528_W.I.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
26.199.8GSM17161113_W.E.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
19.299.7GSM29311328_C047.1O.R9O2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
17.399.7GSM2940924_3111.2G.R9G1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
17.399.7GSM17161915_W.F.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
17.299.7GSM17160612_V.I.M.5, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
16.099.6GSM1717034_W.E.I.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
16.099.6GSM1717126_Y.L.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
14.499.6GSM1717259_Z.F.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.091e-25117PsAffx.C186000001_atPsAffx.C186000001--6e-1At3g11402DC1 domain-containing proteinC.G.S.X.
0.098e-21101PsAffx.C232000016_atPsAffx.C232000016--1e-1At2g25720unknown proteinC.G.S.X.
0.032e-240Gma.9882.1.S1_atAI460435--1e-1At2g31940unknown proteinC.G.S.X.
0.032e-240Gma.11289.1.S1_atBM886440--3e-2At4g17695KAN3 (KANADI 3)C.G.S.X.
0.029e-238PsAffx.C25000076_atPsAffx.C25000076--5e+0At3g56190ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2)C.G.S.X.
0.024e-136PsAffx.CL143Contig1_atPsAffx.CL143Contig1--1e-14At1g50010TUA2C.G.S.X.
0.032e+034PsAffx.CL2473Contig1_atPsAffx.CL2473Contig1--4e+0At1g21460nodulin MtN3 family proteinC.G.S.X.
0.012e+034PsAffx.C7000176_s_atPsAffx.C7000176--5e+0At5g4770060S acidic ribosomal protein P1 (RPP1C)C.G.S.X.
0.012e+034PsAffx.C7000176_atPsAffx.C7000176--5e+0At5g4770060S acidic ribosomal protein P1 (RPP1C)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.037e-238Arabidopsis thalianaAt4g17695827490KAN3 (KANADI 3)F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PO---C.G.S.X.
0.032e+032Hordeum vulgareHVSMEm0008L09r2_atHVSMEm0008L09r2--3e+0At4g23670major latex protein-related / MLP-relatedC.G.S.X.
0.042e+034Oryza sativaOsAffx.26654.1.S1_x_at---0C.G.S.X.
0.042e+034Populus trichocarpaPtpAffx.215776.1.S1_atpmrna30161hypothetical protein-6e-1At4g06634zinc finger (C2H2 type) family proteinC.G.S.X.
0.034e+032Triticum aestivumTaAffx.74960.1.S1_atBJ288212--2e+1At5g11890-C.G.S.X.
0.031e+032Vitis vinifera1616893_s_atCF373473hypothetical protein LOC100253496-2e-2At5g37770TCH2 (TOUCH 2)C.G.S.X.
0.041e-136Zea maysZm.13137.3.A1_a_atAI665175--3e+0At1g54980invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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