Gene omics information

Query gene ID PsAffx.C22000021_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6PsAffx.C22000021_atPsAffx.C22000021--4e+0At4g05070unknown proteinS.X.H.G.
0.6080.7PsAffx.C6000181_atPsAffx.C6000181--4e+0At5g54500FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1)S.X.H.G.
0.4463.3PsAffx.psZG005xN22f_s_atPsAffx.psZG005xN22f--9e+0At5g14602unknown proteinS.X.H.G.
0.2025.1PsAffx.C83000002_atPsAffx.C83000002--9e-1At3g28980unknown proteinS.X.H.G.
0.1013.0PsAffx.C86000041_atPsAffx.C86000041--2e-1At1g31330PSAF (photosystem I subunit F)S.X.H.G.
0.001.4Gma.2534.2.S1_s_atCD393721--2e-76At4g02890UBQ14S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
155.0100.0GSM147951Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stage
82.1100.0GSM201120Laser capture microdissected (LCM) seed coat hourglass at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
68.0100.0GSM17162717_W.L.M.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
65.2100.0GSM29237347_C104.1F.R9F3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
62.199.9GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
38.399.9GSM29291588_1481.1L.R291U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
37.399.9GSM147940Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
34.299.9GSM29244849_C110.1G.V7G1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
34.199.9GSM29283818_C211.1L.SLL3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
31.599.9GSM29426823_2428.2I.R297P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.412e-89329PsAffx.C192000027_atPsAffx.C192000027--2e+1At5g03010kelch repeat-containing proteinC.G.S.X.
0.101e-448PsAffx.C214000023_atPsAffx.C214000023--5e+0At5g06430thioredoxin-relatedC.G.S.X.
0.036e-342PsAffx.CL1038Contig1_atPsAffx.CL1038Contig1--3e-2At2g18050HIS1-3 (HISTONE H1-3)C.G.S.X.
0.014e-136PsAffx.C106000035_atPsAffx.C106000035--4e-1At5g29210unknown proteinC.G.S.X.
0.054e-136HgAffx.22063.1.S1_atBI451495--5e-1At2g30560glycine-rich proteinC.G.S.X.
0.032e+034PsAffx.psZS003xA01f_atPsAffx.psZS003xA01f--5e+0At5g22650HD2B (HISTONE DEACETYLASE 2B)C.G.S.X.
0.022e+034PsAffx.CL690Contig1_s_atPsAffx.CL690Contig1--1e-1At5g17870PSRP6 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 6)C.G.S.X.
0.022e+034PsAffx.C76000046_atPsAffx.C76000046--5e-2At2g28910CXIP4 (CAX INTERACTING PROTEIN 4)C.G.S.X.
0.012e+034PsAffx.C40000041_atPsAffx.C40000041--2e-1At3g19900unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e+032Arabidopsis thalianaAt4g05070825849unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;P---C.G.S.X.
0.035e-134Hordeum vulgareContig23974_atContig23974--3e-1Atmg00240-C.G.S.X.
0.051e-138Oryza sativaOsAffx.28564.1.S1_at---0C.G.S.X.
0.072e+034Populus trichocarpaPtpAffx.224082.1.S1_x_atpmrna42319hypothetical protein-1e-2At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)C.G.S.X.
0.051e+034Triticum aestivumTaAffx.66726.1.S1_atBG905313--2e+1At5g64400-C.G.S.X.
0.041e+032Vitis vinifera1613719_atCF214562hypothetical protein LOC100253441-5e-1At3g50170unknown proteinC.G.S.X.
0.045e-134Zea maysZmAffx.1349.1.S1_s_at40794996-42--9e+0At5g64816unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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