Gene omics information

Query gene ID	PsAffx.C214000023_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.24	30.9	PsAffx.C214000023_at	PsAffx.C214000023	-	-	5e+0	At5g06430	thioredoxin-related	S.X.	H.G.	Please select
0.73	88.9	HgAffx.3851.1.A1_at	CK348839	-	-	2e+1	At5g66005	Expressed protein	S.X.	H.G.	Please select
0.50	71.7	PsAffx.C174000021_at	PsAffx.C174000021	-	-	2e-3	At1g12665	-	S.X.	H.G.	Please select
0.40	57.1	HgAffx.4045.1.S1_s_at	CK348411	-	-	2e-1	At1g54620	invertase/pectin methylesterase inhibitor family protein	S.X.	H.G.	Please select
0.38	53.3	HgAffx.3584.1.A1_s_at	CK349106	-	-	2e+0	At2g37110	unknown protein	S.X.	H.G.	Please select
0.14	17.5	PsAffx.C118000038_at	PsAffx.C118000038	-	-	6e-1	At1g54410	dehydrin family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
149.5	100.0	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
47.1	99.9	GSM147946	Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 2	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
42.5	99.9	GSM294437	91_2465.2J.R186U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
33.2	99.9	GSM294375	35_2473.2J.R052L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
32.1	99.9	GSM294428	83_2450.2J.R161P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
27.2	99.8	GSM294348	10_3163.2J.SLJ1L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
24.6	99.8	GSM147949	Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 2	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
23.5	99.8	GSM147956	Laser capture microdissected (LCM) outer integument at the globular stage, biological replicate 3	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
22.4	99.8	GSM294359	20_2446.2J.R294P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
22.3	99.8	GSM244916	4_SLO.I3U1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.10	1e-4	48	PsAffx.C22000021_at	PsAffx.C22000021	-	-	4e+0	At4g05070	unknown protein	C.G.	S.X.	Please select
0.11	1e-4	48	PsAffx.C192000027_at	PsAffx.C192000027	-	-	2e+1	At5g03010	kelch repeat-containing protein	C.G.	S.X.	Please select
0.01	1e-1	38	PsAffx.C78000054_at	PsAffx.C78000054	-	-	3e-1	At1g22230	unknown protein	C.G.	S.X.	Please select
0.02	1e-1	38	PsAffx.C166000005_s_at	PsAffx.C166000005	-	-	7e-1	At5g07600	oleosin / glycine-rich protein	C.G.	S.X.	Please select
0.01	1e-1	38	PsAffx.C166000008_at	PsAffx.C166000008	-	-	2e+1	At5g23950	C2 domain-containing protein	C.G.	S.X.	Please select
0.01	1e-1	38	PsAffx.C10000001_at	PsAffx.C10000001	-	-	2e+0	At2g21810	CHP-rich zinc finger protein, putative	C.G.	S.X.	Please select
0.02	5e-1	36	HgAffx.2975.1.S1_at	AF500032.1	-	-	3e-3	At3g54770	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please select
0.03	2e+0	34	PsAffx.CL1890Contig1_at	PsAffx.CL1890Contig1	-	-	3e-1	At4g29040	RPT2a (regulatory particle AAA-ATPase 2a)	C.G.	S.X.	Please select
0.04	2e+0	34	PsAffx.CL1460Contig1_at	PsAffx.CL1460Contig1	-	-	2e+1	At4g17480	palmitoyl protein thioesterase family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	5e+0	32	Arabidopsis thaliana	At5g06430	830531	thioredoxin-related	F:unknown;P:unknown;C:unknown;BPO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	6e-1	34	Hordeum vulgare	EBro08_SQ011_L09_at	EBro08_SQ011_L09	-	-	4e+0	At5g02220	unknown protein	C.G.	S.X.	Please select
0.03	2e-1	38	Oryza sativa	Os.7975.1.S1_x_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	7e+0	32	Populus trichocarpa	PtpAffx.88231.1.A1_at	CV275449	hypothetical protein	-	2e+0	At3g46130	MYB111 (MYB DOMAIN PROTEIN 111)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e+0	34	Triticum aestivum	TaAffx.112047.1.S1_at	CA627488	-	-	7e-11	At1g07770	RPS15A (ribosomal protein s15a)	C.G.	S.X.	Please select
0.03	6e+0	30	Vitis vinifera	1607684_at	CF413941	-	-	5e-1	At4g36170	unknown protein	C.G.	S.X.	Please select
0.03	6e-1	34	Zea mays	ZmAffx.903.1.A1_at	AI770912	-	-	1e+1	At3g42310	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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