Gene omics information

Query gene ID PsAffx.C202000014_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6PsAffx.C202000014_atPsAffx.C202000014--5e-1At3g18518RTFL20 (ROTUNDIFOLIA LIKE 20)S.X.H.G.
0.8091.5PsAffx.CL277Contig1_atPsAffx.CL277Contig1--1e-2At1g64040TOPP3S.X.H.G.
0.5071.7PsAffx.CL460Contig1_atPsAffx.CL460Contig1--2e+0At5g19440cinnamyl-alcohol dehydrogenase, putative (CAD)S.X.H.G.
0.4259.3PsAffx.CL268Contig1_atPsAffx.CL268Contig1--6e-9At5g10980histone H3S.X.H.G.
0.3853.3PsAffx.CL483Contig1_atPsAffx.CL483Contig1--8e+0At4g01670unknown proteinS.X.H.G.
0.3346.1PsAffx.CL210Contig1_s_atPsAffx.CL210Contig1--5e+0At3g47490HNH endonuclease domain-containing proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
111.9100.0GSM29430354_3153.2I.R9I2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
102.5100.0GSM29311328_C047.1O.R9O2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
59.199.9GSM2449205_VP9.I5L2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
56.399.9GSM17167528_W.I.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
54.299.9GSM29238459_C093.1F.R9F1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
53.399.9GSM1717259_Z.F.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
51.699.9GSM1717034_W.E.I.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
47.099.9GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
45.599.9GSM1717208_Y.E.I.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
44.699.9GSM17168029_Y.F.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.078e-1375PsAffx.CL293Contig1_atPsAffx.CL293Contig1--2e+0At3g27070TOM20-1 (translocase outer membrane 20-1)C.G.S.X.
0.023e-344PsAffx.C15000130_atPsAffx.C15000130--2e+1At5g17450heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedC.G.S.X.
0.024e-240PsAffx.psHB027xI10f_s_atPsAffx.psHB027xI10f--3e-1At5g4770060S acidic ribosomal protein P1 (RPP1C)C.G.S.X.
0.014e-240PsAffx.C72000045_atPsAffx.C72000045--1e-3At3g22820allergen-relatedC.G.S.X.
0.014e-240PsAffx.C66000047_atPsAffx.C66000047--6e+0At5g65030unknown proteinC.G.S.X.
0.024e-240PsAffx.C205000031_atPsAffx.C205000031--2e+0At5g59280APUM16 (Arabidopsis Pumilio 16)C.G.S.X.
0.014e-240PsAffx.C21000051_atPsAffx.C21000051--2e+0At5g07520GRP18 (GLYCINE-RICH PROTEIN 18)C.G.S.X.
0.014e-240PsAffx.C1000081_atPsAffx.C1000081--8e-1At5g4770060S acidic ribosomal protein P1 (RPP1C)C.G.S.X.
0.042e-138PsAffx.CL575Contig1_atPsAffx.CL575Contig1--5e-1At1g64490unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-136Arabidopsis thalianaAt3g185185008008RTFL20 (ROTUNDIFOLIA LIKE 20)Member of a family of small polypeptides found only in angiosperm lineages.Contains a conserved 29 amino acid domain (RTF or DVL domain).---C.G.S.X.
0.032e-136Hordeum vulgareEBem09_SQ006_J23_atEBem09_SQ006_J23--8e+0At5g09240transcriptional coactivator p15 (PC4) family proteinC.G.S.X.
0.022e-242Oryza sativaOsAffx.30076.1.S1_at---0C.G.S.X.
0.032e-138Populus trichocarpaPtpAffx.223395.1.S1_x_atpmrna41374--3e+0At1g68585unknown proteinC.G.S.X.
0.039e-342Triticum aestivumTaAffx.58588.1.S1_atCA618337--4e-3At1g22490basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.034e-238Vitis vinifera1614172_atCF514056--4e+0At4g27280calcium-binding EF hand family proteinC.G.S.X.
0.022e-136Zea maysZm.17258.1.S1_atCK369580--2e-2At2g36100integral membrane family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage