Gene omics information

Query gene ID PsAffx.C176000026_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7689.7PsAffx.C176000026_atPsAffx.C176000026--7e+0At5g44265lipid bindingS.X.H.G.
0.7790.3PsAffx.CL2251Contig1_atPsAffx.CL2251Contig1--4e+0At3g07425unknown proteinS.X.H.G.
0.7288.1PsAffx.CL1570Contig1_atPsAffx.CL1570Contig1--5e-1At3g2483060S ribosomal protein L13A (RPL13aB)S.X.H.G.
0.7187.8PsAffx.C143000013_atPsAffx.C143000013--2e+0At5g49800-S.X.H.G.
0.6786.1PsAffx.C71000078_atPsAffx.C71000078--2e+0At1g26340CB5-A (CYTOCHROME B5 ISOFORM A)S.X.H.G.
0.6483.4PsAffx.C43000039_atPsAffx.C43000039--3e+0At4g01590unknown proteinS.X.H.G.
0.6181.8PsAffx.C52000040_atPsAffx.C52000040--9e-1At2g20470kinaseS.X.H.G.
0.6181.8PsAffx.C61000020_atPsAffx.C61000020--9e-1At5g19030RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.6181.8PsAffx.C167000023_atPsAffx.C167000023--2e+0At2g36261unknown proteinS.X.H.G.
0.5878.8PsAffx.C18000094_s_atPsAffx.C18000094--3e+0At4g02715unknown proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
62.299.9GSM17161113_W.E.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
26.499.8GSM17166024_Y.I.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
24.699.8GSM17168029_Y.F.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
21.399.8GSM17159910_W.I.M.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
20.999.7GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
19.299.7GSM17161915_W.F.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
19.199.7GSM17167528_W.I.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
18.599.7GSM17160612_V.I.M.5, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
17.299.7GSM1717198_W.L.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
16.799.7GSM1717259_Z.F.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.014e-240PsAffx.C153000036_atPsAffx.C153000036--2e+0At1g19150LHCA6C.G.S.X.
0.022e-138PsAffx.CL105Contig1_atPsAffx.CL105Contig1--2e+0At1g29520AWPM-19-like membrane family proteinC.G.S.X.
0.012e-138PsAffx.C77000065_atPsAffx.C77000065--6e+0At4g13660PRR2 (PINORESINOL REDUCTASE 2)C.G.S.X.
0.012e-138PsAffx.C53000077_s_atPsAffx.C53000077--2e+0At5g52760heavy-metal-associated domain-containing proteinC.G.S.X.
0.012e-138PsAffx.C38000121_atPsAffx.C38000121--4e+0At3g18540unknown proteinC.G.S.X.
0.022e-138PsAffx.C186000008_atPsAffx.C186000008--2e+0At1g66030CYP96A14PC.G.S.X.
0.012e-138PsAffx.C111000034_atPsAffx.C111000034--3e+0At2g42590GRF9 (GENERAL REGULATORY FACTOR 9)C.G.S.X.
0.012e-138PsAffx.C111000034_s_atPsAffx.C111000034--3e+0At2g42590GRF9 (GENERAL REGULATORY FACTOR 9)C.G.S.X.
0.027e-136PsAffx.psMA019xP21f_atPsAffx.psMA019xP21f--5e+0At3g10195-C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.027e+032Arabidopsis thalianaAt5g442655008293lipid bindingEncodes a Protease inhibitor/seed storage/LTP family protein. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.---C.G.S.X.
0.029e-134Hordeum vulgareHVSMEa0012N14r2_s_atHVSMEa0012N14r2--2e-11At2g42740RPL16AC.G.S.X.
0.039e-136Oryza sativaOs05g02294009633.m01227--4e+0At5g42635glycine-rich proteinC.G.S.X.
0.037e-136Populus trichocarpaPtpAffx.223395.1.S1_x_atpmrna41374--3e+0At1g68585unknown proteinC.G.S.X.
0.031e-138Triticum aestivumTaAffx.113053.1.S1_atCA618503--4e+0At3g53530heavy-metal-associated domain-containing proteinC.G.S.X.
0.022e+032Vitis vinifera1612562_atCA808714hypothetical protein LOC100264675-4e-31At5g67370unknown proteinC.G.S.X.
0.033e+032Zea maysZmAffx.117.1.A1_atAI665629serine/threonine-protein kinase NAK-8e+0At3g12835unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage