Gene omics information

Query gene ID PsAffx.C162000008_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7087.1PsAffx.C162000008_atPsAffx.C162000008--8e-2At5g08160ATPK3S.X.H.G.
0.7187.8PsAffx.psMA010xD09f_atPsAffx.psMA010xD09f--1e+0At1g07985Expressed proteinS.X.H.G.
0.6786.1PsAffx.psHB004xH08f_atPsAffx.psHB004xH08f--5e+0At3g61840unknown proteinS.X.H.G.
0.6583.8PsAffx.C34000064_atPsAffx.C34000064--2e+0At5g29560calcium ion bindingS.X.H.G.
0.6583.8HgAffx.9055.1.S1_atCB379446--2e+0At5g49015Expressed proteinS.X.H.G.
0.5979.5PsAffx.C1000091_atPsAffx.C1000091--4e-1At2g21490LEA (DEHYDRIN LEA)S.X.H.G.
0.5778.8PsAffx.CL1693Contig1_atPsAffx.CL1693Contig1--6e+0At5g20190bindingS.X.H.G.
0.5576.3GmaAffx.14280.1.S1_atBM095066--1e-8At1g22710SUC2 (SUCROSE-PROTON SYMPORTER 2)S.X.H.G.
0.5172.3PsAffx.C122000010_atPsAffx.C122000010--6e-1At4g16240unknown proteinS.X.H.G.
0.5071.7GmaAffx.14602.1.S1_atBM731566--2e-1At3g45851unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
21.799.8GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
19.899.7GSM29244849_C110.1G.V7G1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
18.099.7GSM29426823_2428.2I.R297P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.699.3GSM24481318_VP9.I5U4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
7.698.9GSM147947Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stage
6.598.7GSM201109Laser capture microdissected (LCM) cotyledon abaxial epidermis at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
6.598.7GSM29308281_C019.1N.R9N1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.098.5GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
5.898.4GSM201099Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
5.698.3GSM191077Soybean_Cotyledon_SUS1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e-450PsAffx.C15000120_atPsAffx.C15000120--8e-1At2g26240unknown proteinC.G.S.X.
0.011e-140PsAffx.C36000022_atPsAffx.C36000022--4e-1At1g56300DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.011e-140GmaAffx.62129.1.S1_atBE023298--5e-4At3g49790ATP bindingC.G.S.X.
0.004e-138PsAffx.C78000024_atPsAffx.C78000024--2e-1At5g03280EIN2 (ETHYLENE INSENSITIVE 2)C.G.S.X.
0.014e-138PsAffx.C60000023_atPsAffx.C60000023--4e+0At3g42990unknown proteinC.G.S.X.
0.012e+036PsAffx.C137000008_atPsAffx.C137000008--2e-1At1g12630DNA binding / transcription activator/ transcription factorC.G.S.X.
0.012e+036PsAffx.C106000043_atPsAffx.C106000043--5e-2At1g30475-C.G.S.X.
0.012e+036GmaAffx.7280.1.S1_atAW459314--8e-9At4g34040zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.017e+034PsAffx.psMC004xI15f_s_atPsAffx.psMC004xI15f--2e+0At3g58850PAR2 (PHY RAPIDLY REGULATED 2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.018e-240Arabidopsis thalianaAt5g08160830712ATPK3Encodes a serine/threonine protein kinase.---C.G.S.X.
0.016e-136Hordeum vulgareContig25477_atContig25477--6e+0At5g33421unknown proteinC.G.S.X.
0.016e-138Oryza sativaOs01g0879800AK072787.1-Zn-finger, CCHC type domain containing protein5e-2At3g66656AGL91C.G.S.X.
0.014e-138Populus trichocarpaPtpAffx.85024.1.A1_atCX183923hypothetical protein-8e-5At2g29140APUM3 (Arabidopsis Pumilio 3)C.G.S.X.
0.018e-240Triticum aestivumTa.11283.2.S1_a_atCA600437--1e+0At3g60280UCC3 (UCLACYANIN 3)C.G.S.X.
0.016e+032Vitis vinifera1614343_atCF403691hypothetical protein LOC100267291-3e+0At5g60910AGL8 (agamous-like 8)C.G.S.X.
0.018e+032Zea maysZm.9295.1.A1_atBM269221--2e-1At1g03055unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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