Gene omics information

Query gene ID	PsAffx.C150000036_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	PsAffx.C150000036_at	PsAffx.C150000036	-	-	1e+0	At5g58110	ATPase activator/ chaperone binding	S.X.	H.G.	Please select
0.55	76.3	PsAffx.C1000091_at	PsAffx.C1000091	-	-	4e-1	At2g21490	LEA (DEHYDRIN LEA)	S.X.	H.G.	Please select
0.50	71.7	PsAffx.C34000064_at	PsAffx.C34000064	-	-	2e+0	At5g29560	calcium ion binding	S.X.	H.G.	Please select
0.36	50.8	GmaAffx.10787.1.S1_at	BU965232	-	-	1e-2	At5g16790	-	S.X.	H.G.	Please select
0.29	39.0	HgAffx.17965.1.S1_at	CB278425	-	-	2e+0	At2g23340	AP2 domain-containing transcription factor, putative	S.X.	H.G.	Please select
0.16	19.7	HgAffx.19033.4.A1_at	CK350593	-	-	6e-2	At1g54410	dehydrin family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
21.5	99.8	GSM308559	Mature Soybean (Glycine max) pollen grains Replicate 2	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
18.5	99.7	GSM292908	81_1454.1L.R277P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
15.1	99.6	GSM292836	16_1473.1L.R287U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
13.0	99.5	GSM293698	35_2142.2C.R116P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.7	99.5	GSM292169	24_1018.1A.R010P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.7	99.4	GSM308556	Mature Soybean (Glycine max) pollen grains replicate 1	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
10.3	99.3	GSM308560	Mature Soybean (Glycine max) pollen grains Replicate 3	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
9.8	99.3	GSM293077	77_1077.1N.R046L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.7	99.3	GSM244814	19_SLO.M5W2.CEL, Experimental replicate 2	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
9.3	99.2	GSM292198	5_C008.1A.V7A2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e-6	54	PsAffx.C72000014_at	PsAffx.C72000014	-	-	5e+0	At4g04470	PMP22	C.G.	S.X.	Please select
0.01	3e-1	36	PsAffx.C41000049_at	PsAffx.C41000049	-	-	2e-2	At5g10950	cylicin-related	C.G.	S.X.	Please select
0.01	3e-1	36	PsAffx.C184000012_at	PsAffx.C184000012	-	-	1e-4	At1g59820	ALA3 (Aminophospholipid ATPase3)	C.G.	S.X.	Please select
0.01	3e-1	36	PsAffx.C184000012_s_at	PsAffx.C184000012	-	-	1e-4	At1g59820	ALA3 (Aminophospholipid ATPase3)	C.G.	S.X.	Please select
0.03	1e+0	34	PsAffx.psZS008xC12f_at	PsAffx.psZS008xC12f	-	-	1e+0	At3g58470	methyltransferase/ nucleic acid binding	C.G.	S.X.	Please select
0.04	1e+0	34	PsAffx.psZG008xD07f_s_at	PsAffx.psZG008xD07f	-	-	3e+0	At5g67245	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	34	PsAffx.CL230Contig1_at	PsAffx.CL230Contig1	-	-	1e-2	At2g20140	26S protease regulatory complex subunit 4, putative	C.G.	S.X.	Please select
0.01	1e+0	34	PsAffx.C65000036_at	PsAffx.C65000036	-	-	8e-2	At3g09880	ATB' BETA	C.G.	S.X.	Please select
0.01	1e+0	34	PsAffx.C56000057_at	PsAffx.C56000057	-	-	1e+0	At4g39560	kelch repeat-containing F-box family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+0	34	Arabidopsis thaliana	At5g58110	835923	ATPase activator/ chaperone binding	F:ATPase activator activity, chaperone binding;P:biological_process unknown;C:cytoplasm;MPO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e+0	32	Hordeum vulgare	HB25K17r_at	HB25K17r	-	-	2e+0	At4g09260	unknown protein	C.G.	S.X.	Please select
0.04	5e-1	36	Oryza sativa	Os08g0173400	9636.m00708	-	-	7e-5	At3g50550	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	1e+0	34	Populus trichocarpa	PtpAffx.13638.1.S1_a_at	CV226837	hypothetical protein	-	5e-4	At4g14410	basic helix-loop-helix (bHLH) family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e+0	34	Triticum aestivum	TaAffx.57761.1.S1_at	CA625294	-	-	6e-2	At2g44525	unknown protein	C.G.	S.X.	Please select
0.04	1e+0	32	Vitis vinifera	1619658_at	CF371851	-	-	4e-15	At2g14960	GH3.1	C.G.	S.X.	Please select
0.04	2e+0	32	Zea mays	Zm.17796.1.S1_at	CK371328	-	-	5e-1	At3g23130	SUP (SUPERMAN)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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