Gene omics information

Query gene ID	PsAffx.C136000026_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	PsAffx.C136000026_at	PsAffx.C136000026	-	-	7e-3	At3g01860	unknown protein	S.X.	H.G.	Please select
0.67	86.1	HgAffx.23882.1.S1_at	BF013967	-	-	2e-1	At1g52695	phospholipase/carboxylesterase family protein	S.X.	H.G.	Please select
0.31	42.2	GmaAffx.90742.1.S1_x_at	CF806467	-	-	2e-14	At5g46430	60S ribosomal protein L32 (RPL32B)	S.X.	H.G.	Please select
0.29	39.0	PsAffx.psHB012xG08f_at	PsAffx.psHB012xG08f	-	-	2e-1	At1g53580	GLY3 (GLYOXALASE II 3)	S.X.	H.G.	Please select
0.09	12.0	GmaAffx.65235.1.A1_at	BU544694	-	-	4e+0	At3g12510	unknown protein	S.X.	H.G.	Please select
0.01	3.4	GmaAffx.14280.1.S1_at	BM095066	-	-	1e-8	At1g22710	SUC2 (SUCROSE-PROTON SYMPORTER 2)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
29.2	99.8	GSM191084	Soybean_Cotyledon_EPD2	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
19.2	99.7	GSM294462	2_2490.2K.R008P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
17.3	99.7	GSM294369	2_2439.2J.R135L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
15.8	99.6	GSM294378	38_2438.2J.R091P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
15.0	99.6	GSM294362	23_2443.2J.R083U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
14.8	99.6	GSM294359	20_2446.2J.R294P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
13.6	99.5	GSM294397	55_2458.2J.R073P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.5	99.5	GSM294363	24_2441.2J.R198U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.4	99.5	GSM294349	11_2465.2J.R186L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.2	99.5	GSM293841	80_3066.2D.R9D2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	1e-2	42	PsAffx.C71000035_at	PsAffx.C71000035	-	-	1e-2	At3g49470	NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2)	C.G.	S.X.	Please select
0.01	1e-2	42	PsAffx.C120000009_at	PsAffx.C120000009	-	-	3e-1	At1g29179	-	C.G.	S.X.	Please select
0.02	1e-2	42	PsAffx.C1031000001_at	PsAffx.C1031000001	-	-	1e-1	At1g29179	-	C.G.	S.X.	Please select
0.01	4e-2	40	PsAffx.C38000104_at	PsAffx.C38000104	-	-	4e-5	At5g56950	NAP1	C.G.	S.X.	Please select
0.01	2e-1	38	PsAffx.C51000024_at	PsAffx.C51000024	-	-	3e-1	At4g12740	adenine-DNA glycosylase-related / MYH-related	C.G.	S.X.	Please select
0.01	2e-1	38	PsAffx.C166000015_at	PsAffx.C166000015	-	-	1e-3	At5g62390	ATBAG7 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 7)	C.G.	S.X.	Please select
0.03	2e-1	38	GmaAffx.35808.1.S1_at	BF324334	-	-	4e-21	At4g38600	KAK (KAKTUS)	C.G.	S.X.	Please select
0.02	2e-1	38	Gma.1320.1.S1_s_at	CD413805	-	-	2e-3	At5g19320	RANGAP2 (RAN GTPASE ACTIVATING PROTEIN 2)	C.G.	S.X.	Please select
0.01	6e-1	36	PsAffx.C95000011_at	PsAffx.C95000011	-	-	1e-1	At5g04980	endonuclease/exonuclease/phosphatase family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	7e-3	42	Arabidopsis thaliana	At3g01860	820070	unknown protein	F:molecular_function unknown;P:response to cadmium ion;C:chloroplast;PM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e-1	36	Hordeum vulgare	HF21N04r_at	HF21N04r	-	-	2e+0	At4g19150	ankyrin repeat family protein	C.G.	S.X.	Please select
0.04	2e-1	38	Oryza sativa	Os05g0164600	9633.m00646	-	-	9e-1	At2g28440	proline-rich family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	4e-2	40	Populus trichocarpa	PtpAffx.212115.1.S1_at	pmrna23759	hypothetical protein	-	1e-2	At5g63650	SNRK2.5 (SNF1-RELATED PROTEIN KINASE 2.5)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e-1	38	Triticum aestivum	TaAffx.51251.1.S1_at	CA728679	-	-	2e+0	At4g21500	unknown protein	C.G.	S.X.	Please select
0.04	1e-1	36	Vitis vinifera	1621192_at	CF516648	hypothetical protein LOC100248705	-	4e+0	At2g27920	SCPL51 (SERINE CARBOXYPEPTIDASE-LIKE 51)	C.G.	S.X.	Please select
0.03	5e-2	38	Zea mays	Zm.4413.1.S1_s_at	AI714737	-	-	4e-10	At3g42790	AL3 (ALFIN-LIKE 3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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