Gene omics information

Query gene ID PsAffx.C122000010_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4360.6PsAffx.C122000010_atPsAffx.C122000010--6e-1At4g16240unknown proteinS.X.H.G.
0.6382.9PsAffx.C34000064_atPsAffx.C34000064--2e+0At5g29560calcium ion bindingS.X.H.G.
0.4867.7PsAffx.psHB004xH08f_atPsAffx.psHB004xH08f--5e+0At3g61840unknown proteinS.X.H.G.
0.4867.7GmaAffx.14280.1.S1_atBM095066--1e-8At1g22710SUC2 (SUCROSE-PROTON SYMPORTER 2)S.X.H.G.
0.4766.6GmaAffx.14602.1.S1_atBM731566--2e-1At3g45851unknown proteinS.X.H.G.
0.4057.1HgAffx.14720.1.A1_atCK350926--2e-1At1g66360C2 domain-containing proteinS.X.H.G.
0.3040.4GmaAffx.47834.1.A1_atAF175392.1--3e-1At4g16330oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donorsS.X.H.G.
0.3040.4PsAffx.CL1850Contig1_atPsAffx.CL1850Contig1--3e+0At5g15960KIN1S.X.H.G.
0.2633.9HgAffx.19033.4.A1_atCK350593--6e-2At1g54410dehydrin family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.699.4GSM147938Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stage
10.299.3GSM29244849_C110.1G.V7G1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.399.2GSM29319577_1130.1O.R082P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.199.0GSM29283818_C211.1L.SLL3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.398.9GSM17161113_W.E.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
7.398.9GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.298.9GSM29308281_C019.1N.R9N1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.098.8GSM29426823_2428.2I.R297P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.998.5GSM24489637_VP9.M1W2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
5.898.4GSM2449164_SLO.I3U1.CEL, Experimental replicate 1GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.015e-240PsAffx.C296000003_atPsAffx.C296000003--8e-2At4g08270-C.G.S.X.
0.035e-240GmaAffx.62769.1.S1_s_atBE583844--3e+0At5g39190GER2 (GERMIN-LIKE PROTEIN 2)C.G.S.X.
0.022e-138PsAffx.psZO006iG04r_atPsAffx.psZO006iG04r--4e+0At3g05230signal peptidase subunit family proteinC.G.S.X.
0.022e-138PsAffx.C35000096_atPsAffx.C35000096--1e-2At3g25400-C.G.S.X.
0.032e-138PsAffx.C3000067_atPsAffx.C3000067--1e+0At4g16520ATG8F (autophagy 8f)C.G.S.X.
0.012e-138PsAffx.C193000006_atPsAffx.C193000006--1e-2At5g66460(1-4)-beta-mannan endohydrolase, putativeC.G.S.X.
0.012e-138PsAffx.C161000013_atPsAffx.C161000013--3e+0At1g64890integral membrane transporter family proteinC.G.S.X.
0.022e-138HgAffx.15678.1.S1_atCB281316--4e+0At2g29530mitochondrial import inner membrane translocase (TIM10)C.G.S.X.
0.022e-138Gma.68.1.S1_atAF357211.1ethylene-responsive element binding protein 1-7e-9At4g17500ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.036e-136Arabidopsis thalianaAt4g16240827318unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOFVA---C.G.S.X.
0.025e-342Hordeum vulgareContig5083_atContig5083--3e-2At2g30410KIS (KIESEL)C.G.S.X.
0.027e-240Oryza sativaOsAffx.23236.1.S1_at---0C.G.S.X.
0.023e+034Populus trichocarpaPtpAffx.22431.2.S1_a_atDN502178hypothetical protein-1e-2At3g29780RALFL27 (ralf-like 27)C.G.S.X.
0.022e-138Triticum aestivumTa.3867.2.S1_x_atCA639912--2e-5At4g26850VTC2 (vitamin c defective 2)C.G.S.X.
0.037e-134Vitis vinifera1619833_atCF515145--1e+0At5g50345-C.G.S.X.
0.023e-136Zea maysZmAffx.361.1.A1_atAI670571--8e-1At1g15800unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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