Gene omics information

Query gene ID PsAffx.C112000042_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6PsAffx.C112000042_atPsAffx.C112000042--9e-2At1g62333unknown proteinS.X.H.G.
0.5071.7Gma.437.1.S1_s_atCD401627Profilin, PRO2-1e-10At2g19760PRF1 (PROFILIN 1)S.X.H.G.
0.5071.7GmaAffx.89861.1.S1_s_atCK606562Ubiquitin-3e-127At4g05320UBQ10 (POLYUBIQUITIN 10)S.X.H.G.
0.5071.7Gma.2534.1.S1_s_atBI967545Ubiquitin-2e-140At4g05320UBQ10 (POLYUBIQUITIN 10)S.X.H.G.
0.4057.1HgAffx.17965.1.S1_atCB278425--2e+0At2g23340AP2 domain-containing transcription factor, putativeS.X.H.G.
0.0710.2GmaAffx.12608.1.A1_atBE583858--2e-1At3g46380unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
15.799.6GSM308560Mature Soybean (Glycine max) pollen grains Replicate 3GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
15.499.6GSM2921985_C008.1A.V7A2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
13.799.5GSM29216924_1018.1A.R010P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.299.5GSM29283818_C211.1L.SLL3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.399.1GSM17161915_W.F.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
8.399.1GSM17169432_V.L.M.3, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
7.799.0GSM1717044_Y.A.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
7.298.9GSM182035Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stage
6.598.7GSM29216215-1002.1A.R001P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.098.5GSM17161714_Z.B.M.3, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.136e-50198PsAffx.C112000043_atPsAffx.C112000043--2e-3At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)C.G.S.X.
0.038e-342GmaAffx.81790.1.S1_atBG508508--6e-3At2g21060ATGRP2B (GLYCINE-RICH PROTEIN 2B)C.G.S.X.
0.028e-342Gma.9020.2.S1_atAI736080--1e-14At2g43970La domain-containing proteinC.G.S.X.
0.013e-240PsAffx.C1000069_atPsAffx.C1000069--3e-1At1g66140ZFP4 (ZINC FINGER PROTEIN 4)C.G.S.X.
0.033e-240HgAffx.18718.1.S1_atCA940462--2e-1At5g61080C.G.S.X.
0.021e-138PsAffx.CL1006Contig1_atPsAffx.CL1006Contig1--3e+0At3g60700unknown proteinC.G.S.X.
0.011e-138PsAffx.C82000018_atPsAffx.C82000018--3e-1At5g07260homeobox protein-relatedC.G.S.X.
0.011e-138PsAffx.C49000010_atPsAffx.C49000010--3e-2At1g17440EER4 (ENHANCED ETHYLENE RESPONSE 4)C.G.S.X.
0.011e-138PsAffx.C114000033_s_atPsAffx.C114000033--1e+0At4g26580protein binding / zinc ion bindingC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.049e-238Arabidopsis thalianaAt1g623336240573unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOPBFVA---C.G.S.X.
0.033e-342Hordeum vulgareContig25612_atContig25612--2e-6At1g77120ADH1 (ALCOHOL DEHYDROGENASE 1)C.G.S.X.
0.053e-344Oryza sativaOsAffx.5615.1.S1_at---0C.G.S.X.
0.043e-240Populus trichocarpaPtpAffx.207592.1.S1_atpmrna15066hypothetical protein-3e+0At5g14370-C.G.S.X.
0.034e-136Triticum aestivumTaAffx.54566.1.S1_s_atCA679969--8e-1At2g27030CAM5 (CALMODULIN 5)C.G.S.X.
0.033e-238Vitis vinifera1618771_s_atCD715283hypothetical protein LOC100262843-3e-4At1g25560TEM1 (TEMPRANILLO 1)C.G.S.X.
0.046e-134Zea maysZmAffx.873.1.A1_atAI770779--5e-2At4g30460glycine-rich proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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