Gene omics information

Query gene ID Os12g0639900
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8395.8Os12g06399009640.m04362--2e-1At1g52827unknown proteinS.X.H.G.
0.6787.2Os12g01158339640.m00142--1e+1At5g11280unknown proteinS.X.H.G.
0.5777.0Os03g06381009631.m04211--3e+0At2g22470AGP2 (ARABINOGALACTAN PROTEIN 2)S.X.H.G.
0.5573.7Os11g06307409639.m03790--3e-1At1g64220TOM7-2 (TRANSLOCASE OF OUTER MEMBRANE 7 KDA SUBUNIT 2)S.X.H.G.
0.5068.0Os07g06321009635.m04398--5e+0At5g01530chlorophyll A-B binding protein CP29 (LHCB4)S.X.H.G.
0.3134.5Os01g0280100NM_188135.1--7e-1At5g28610-S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
84.5100.0GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in Musa
30.599.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in Musa
26.899.6GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.299.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.199.5GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in Musa
25.099.5GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.999.5GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.999.2GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.698.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.598.9GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.051e-138Os06g0579400AK111053.1-Hypothetical protein3e+0At5g18540unknown proteinC.G.S.X.
0.022e-344Os03g0216700AK101556.1-Multi antimicrobial extrusion protein MatE familyprotein2e-2At5g65160tetratricopeptide repeat (TPR)-containing proteinC.G.S.X.
0.021e-138Os03g0808300AK109389.2-Remorin, C-terminal region domain containingprotein2e-1At1g05270TraB family proteinC.G.S.X.
0.011e-138Os02g0806700AK072167.1-Retroelement pol polyprotein-like7e-12At2g38970zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.062e-136Arabidopsis thalianaAt1g528272745823unknown proteinF:molecular_function unknown;P:biological_process unknown;C:membrane;P---C.G.S.X.
0.043e-136Glycine maxPsAffx.CL1883Contig1_atPsAffx.CL1883Contig1--9e+0At4g29340PRF4 (PROFILIN 4)C.G.S.X.
0.045e-134Hordeum vulgareS0001000058B11F1_atS0001000058B11F1--2e-1At2g24590splicing factor, putativeC.G.S.X.
0.043e-136Populus trichocarpaPtpAffx.220590.1.S1_atpmrna36995--7e-1At3g04590DNA-binding family proteinC.G.S.X.
0.042e-136Triticum aestivumTaAffx.53675.1.S1_atCK208322--4e-5At5g46730glycine-rich proteinC.G.S.X.
0.031e+032Vitis vinifera1614835_atBQ799710hypothetical protein LOC100254702-4e-13At4g29870-C.G.S.X.
0.034e-134Zea maysZm.11733.1.A1_atBM380308--2e+1At5g40190calmodulin-binding proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage