CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os12g0639700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 68.0 Os12g0639700 AK069880.1 - - 5e-8 At5g15050 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein S.X. H.G.
0.80 94.6 Os12g0556400 AK062903.1 - Conserved hypothetical protein 2e-5 At1g16000 unknown protein S.X. H.G.
0.73 91.1 Os04g0620500 CB667511 - Hypothetical protein 2e-2 At1g30470 SIT4 phosphatase-associated family protein S.X. H.G.
0.47 62.3 Os09g0415800 AK071371.1 - Phosphofructokinase family protein 5e-18 At2g22480 PFK5 (PHOSPHOFRUCTOKINASE 5) S.X. H.G.
0.32 36.3 Os01g0496900 AK069894.1 - P-type trefoil domain containing protein 2e-39 At3g16200 unknown protein S.X. H.G.
0.31 34.5 Os03g0253800 AK120111.1 - Hypothetical protein 9e-8 At4g00026 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.1 98.4 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.0 98.3 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.0 98.3 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.7 98.2 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.6 98.1 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.5 98.1 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.9 98.0 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.9 98.0 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.2 97.9 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.8 97.8 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.40 1e-44 182 Os03g0692000 9631.m04726 - Glycosyl transferase, family 14 protein 7e-4 At5g15050 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein C.G. S.X.
0.12 3e-17 91 Os10g0437000 CB657474 - Glycosyl transferase, family 14 protein 1e-5 At3g03690 UNE7 (unfertilized embryo sac 7) C.G. S.X.
0.12 2e-12 75 Os01g0201100 C98975 - Glycosyl transferase, family 14 protein 1e+1 Atmg00110 - C.G. S.X.
0.10 2e-15 85 Os08g0143500 AK061094.1 - Glycosyl transferase, family 14 protein 3e-2 At5g15050 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein C.G. S.X.
0.08 1e-13 79 Os06g0602800 AK070134.1 - Conserved hypothetical protein 2e-7 At5g15050 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 5e-8 59 Arabidopsis thaliana At5g15050 831357 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein F:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process;C:membrane;MPBVO - - - C.G. S.X.
0.18 1e-21 105 Glycine max GmaAffx.68089.1.S1_at BE554824 - - 2e-25 At5g15050 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein C.G. S.X.
0.34 3e-91 335 Hordeum vulgare Contig14045_at Contig14045 - - 2e-18 At3g03690 UNE7 (unfertilized embryo sac 7) C.G. S.X.
0.12 2e-23 111 Populus trichocarpa PtpAffx.205088.1.S1_at pmrna10083 hypothetical protein - 2e-3 At5g15050 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein C.G. S.X.
0.25 6e-42 173 Triticum aestivum Ta.12174.1.A1_at CD452810 - - 1e-14 At3g03690 UNE7 (unfertilized embryo sac 7) C.G. S.X.
0.12 4e-15 81 Vitis vinifera 1622113_at CF209612 hypothetical protein LOC100245719 - 4e-61 At5g15050 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein C.G. S.X.
0.08 4e-10 65 Zea mays Zm.6873.1.A1_at CK369786 - - 2e+1 At4g08870 arginase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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